Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 147 5e-30
>seq1950
Length=170036
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||||||||| || || || |||||||||| || || | ||||| |||
Sbjct 63460 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCG 63401
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || |||||||| | || || ||||| || ||||| || || ||||| |||
Sbjct 63400 AGTTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGA 63341
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||||||||| ||| || || || ||||| | ||||||
Sbjct 63340 ATCTTGGACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTT 63281
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || || || | ||||||
Sbjct 63280 CCAGTGAGGGTCTTGACAAAGATTTGCAT 63252
Score = 125 bits (138), Expect = 2e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||||||||| || |||||||||||||| | |||||| | || || |||
Sbjct 63232 ACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 63173
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || ||||| || || || || || || |||||||| || || ||||| ||
Sbjct 63172 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGG 63113
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || || ||||| || || || || ||||| | |||||
Sbjct 63112 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 63053
Query 195112 CCTGTCA 195118
|| ||||
Sbjct 63052 CCGGTCA 63046
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 5/209 (2%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||| ||| || || || ||||| ||| || || | || || ||||||||
Sbjct 63688 GTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCGTCCTCGAGCTG 63629
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| || || || |||||||| || ||||| || ||||||||||| ||
Sbjct 63628 CTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTT 63569
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTC-----CACTTCAAGGGTAACCGTCTTT 195111
|||||| || || |||||||| || ||| ||||||||| || | |||||
Sbjct 63568 CGACTTGACATTGTCGATGGTGTCTGATGATTCCACTTCACTTCAAGTGTGATAGTCTTG 63509
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 63508 CCGGTGAGTGTCTTGACGAAGATCTGCAT 63480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109444270798142
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |