Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2106 127 2e-24
>seq2106
Length=142898
Score = 127 bits (140), Expect = 2e-24
Identities = 341/521 (65%), Gaps = 3/521 (1%)
Strand=Plus/Minus
Query 18997 ATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATA 19056
|||||||| || || || || | ||| | ||| || || | || || |||||||| ||
Sbjct 23726 ATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTCTTCAACCAGAAGATG 23667
Query 19057 GAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCT 19116
|| || || || ||||| ||||| ||||| || || || || ||||| | ||||
Sbjct 23666 GACGCGAACGACCCAGAGAAGAAGATACCCTCGACAGCAGCGAAAGCGATCAGTCGGCAG 23607
Query 19117 CCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACA 19176
|| | | | || || | | |||||| || |||||| ||||||||||| | |
Sbjct 23606 GCAAAGGTCGAATTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATA 23547
Query 19177 CATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATAT 19236
||||| || | || || | || || ||||| |||| | | || | | ||
Sbjct 23546 CATGGGATGTTATCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAG 23487
Query 19237 GCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCG 19296
| || || | | ||| |||| || || || || || || ||||| ||||||
Sbjct 23486 GTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCG 23427
Query 19297 TAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCA 19356
|| || |||| |||||| | ||||||||||||||| | || | || |||| || ||
Sbjct 23426 TAGAAGCATCGTGCTTCAGGTATCTGTACTTCACTGCTGAAACGCTCAACCAGGTTCTCG 23367
Query 19357 TTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCA 19416
|| || ||||||||| || || || || || | || ||| || || | | ||
Sbjct 23366 TTGACAATTCCATCAGATGCGGCGAAGAAAGCAAGGACGTGTGAGATGAAGTATCGCTCG 23307
Query 19417 TCTGAGGTTAAT---GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473
|| | | ||| | ||||| || | || || || || | ||| | || ||| |
Sbjct 23306 TCATCGTTCAATCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCA 23247
Query 19474 GTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514
||||| || || || || ||||| || ||||| | ||||||
Sbjct 23246 GTCCAGAAGGACGCTTCAGCTTTCTTGTACATCTGCCATAT 23206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562090348778640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |