Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq635 206 5e-48
seq2106 170 4e-37
>seq635
Length=74236
Score = 206 bits (228), Expect = 5e-48
Identities = 723/1116 (65%), Gaps = 41/1116 (4%)
Strand=Plus/Plus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTT---CGGCCTGGGCGCAAGACTGCGTCAGG 221422
|| ||||||| |||||| || || |||| | ||| | | || ||| |||| |
Sbjct 34764 CCTTCGTACGTCTCGTATGGGCCA---AGTTTCTCAGCCAGCTCACAGGACGCAGTCAAG 34820
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482
|| || ||||| ||||||||||||||| ||||||||| ||||| ||||| |
Sbjct 34821 GCGGCATGGTAAATGGTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCG 34880
Query 221483 AAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542
|||||||| || || | ||| | || || || ||||| || || | |||||||||
Sbjct 34881 AAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGG 34940
Query 221543 CTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGA 221602
| ||| | |||| ||| |||||||| ||||| ||||| |||||
Sbjct 34941 CGGTGACGGAAGTTGCTCTTCCTCGCCTCTGGCACAGGATAGTGGTTGATCTCGATGGTC 35000
Query 221603 TTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACC 221662
||||| | |||| |||| ||||| ||| || ||| ||||||| |
Sbjct 35001 TTGTTCAAGTTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTG------------ 35048
Query 221663 AACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG---CCAGG 221719
|| ||| | |||| || || | | || || | || | | |||||
Sbjct 35049 AAGTCGTAGGTCTCGTTCTCAATGTCAACGTATG---TTGGGAGAGCGATCGAAGCCAGG 35105
Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779
|| || || || ||||| || || |||| |||||||| || ||||||||| |
Sbjct 35106 TTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAG 35165
Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839
| ||| || || |||| || || || |||||| ||| ||| |||||||| ||
Sbjct 35166 CTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGG 35225
Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA-GTTCTCTGGC 221898
|| || || ||||||||||| ||||||| | || || || ||| | |||| | ||
Sbjct 35226 ATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAATCTTCTGT-GC 35284
Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAA 221958
|| || || ||| | | | ||| | ||| || ||| || ||| | || ||
Sbjct 35285 GCGGACAGT-CTCACGGCCACGGCCTTG--CTTCTCGTACTGCTCGTAAAGCTTTTCGAA 35341
Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTG 222018
|| || ||||| | ||| | || || || ||| ||| ||||| || |||| |
Sbjct 35342 CTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGGCACATGAGGGTCCATTC 35401
Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078
||| || | || | || |||||| || || |||||||| || || || || ||
Sbjct 35402 GCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTC 35461
Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138
| | || || ||| ||||| ||||| | || |||| || | || | ||
Sbjct 35462 ACGAGCGCGGACTTCTTCCTTGCCGTGATTTTTGCGGAGGTCCATGAAGGCCAAGACATC 35521
Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATC 222198
||||||||| ||||| || |||| ||| | ||| || || ||||| ||||||||||| |
Sbjct 35522 AGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTGCCACCCTGGT- 35580
Query 222199 CACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257
|| | | ||| | |||| ||| || || | || ||||||||||||||| |
Sbjct 35581 CAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCCGTTGGATGTGC 35640
Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC----ATGCCG 222313
|||| ||||| || |||| ||| | | || | | || ||| | ||
Sbjct 35641 CGTTCGTGCCTCCGATATACG---AGCCAGTCGCGCGGATGC-GGTGGACGTTGAGACCA 35696
Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373
|| || || |||| || ||||||||||| || ||||||||||||| ||| |||||
Sbjct 35697 ATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCCTCG 35756
Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTGGAACA 222432
|| ||| ||||| | || | || ||| || || | | ||||| ||| || | | ||
Sbjct 35757 ATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCATTAGGCGTACCA 35816
Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468
||| | || |||||||| |||||||| |||||
Sbjct 35817 -GCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTA 35851
>seq2106
Length=142898
Score = 170 bits (188), Expect = 4e-37
Identities = 560/863 (65%), Gaps = 36/863 (4%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|||||| ||||||||||||| ||| || || |||||| || || ||||||||||||
Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTAT---CCAAAGACGAGCAGCATTT--TCTCA 25591
|||||||| | ||| |||| || || | | ||||||| | || |||||
Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
|||| | || ||||| || || |||||||| || || |||||||| ||| |||
Sbjct 23326 --CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAGC 23383
Query 25652 GATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
| |||| ||| ||||| ||| ||| || || | | || |||||||| ||||||||
Sbjct 23384 GTTTCAGCAGTGAAGTACAGATACCTGAAGCACGA-TGCTTCTACGGATTCCAGATCATG 23442
Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTC 25770
|| || || | ||||| || || || |||| | || ||||| ||| ||
Sbjct 23443 ATGGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACAT--CAG-CGAA 23499
Query 25771 GCCGAG-AGAGATC--GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827
|| || || |||| || || |||||||| |||| || | ||| | ||||
Sbjct 23500 CCCAAGCAGCGATCATATCTCTTCAACGCCATCGATAACATCCCATGTATCCGTAAGAAG 23559
Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887
|| ||||| || |||||| | ||| | || |||| | || ||| |
Sbjct 23560 GCTGACTGGGCATTGCGATGGATCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATC 23619
Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947
|| || |||||||| ||||| ||||| ||| || ||||| ||| ||||||||||| |
Sbjct 23620 GCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTG 23679
Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
||| || || |||| |||| || || || ||||| | ||| | ||||||
Sbjct 23680 AAGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAG 23739
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC-TTC 26066
|| | |||| ||| || || |||||||| | | | |||| | |||| || |
Sbjct 23740 GGCATGCACACAGACTTCGCGTGCCTGCTGTTCTC---CCACCTCAAGAACAAGCCGGAC 23796
Query 26067 TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126
|| | ||| | || |||||| |||||||| | || ||| | || || |
Sbjct 23797 GCATCA-CTCGTGCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCAC 23855
Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186
| |||||||| || |||||| |||| ||||| ||
Sbjct 23856 AGATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGA 23915
Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTAC 26240
|| ||| || |||| |||| ||| ||| ||||| ||||| |||||| ||
Sbjct 23916 GTTTGTCGCAGACCGTCTGTTGT------TGGCACTCGGCAACCAGAAGTTCTACA--AC 23967
Query 26241 GC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298
|| | ||||| |||||||| ||||| ||||| || | | || ||||||||||| ||
Sbjct 23968 GCCACCAACCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTC 24027
Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321
|| ||| | || || ||||| ||
Sbjct 24028 GAGAAGCGTGTTGGTGACTACCA 24050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928814310669440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |