Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq635 206 5e-48 seq2106 170 4e-37 >seq635 Length=74236 Score = 206 bits (228), Expect = 5e-48 Identities = 723/1116 (65%), Gaps = 41/1116 (4%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTT---CGGCCTGGGCGCAAGACTGCGTCAGG 221422 || ||||||| |||||| || || |||| | ||| | | || ||| |||| | Sbjct 34764 CCTTCGTACGTCTCGTATGGGCCA---AGTTTCTCAGCCAGCTCACAGGACGCAGTCAAG 34820 Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482 || || ||||| ||||||||||||||| ||||||||| ||||| ||||| | Sbjct 34821 GCGGCATGGTAAATGGTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCG 34880 Query 221483 AAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542 |||||||| || || | ||| | || || || ||||| || || | ||||||||| Sbjct 34881 AAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGG 34940 Query 221543 CTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGA 221602 | ||| | |||| ||| |||||||| ||||| ||||| ||||| Sbjct 34941 CGGTGACGGAAGTTGCTCTTCCTCGCCTCTGGCACAGGATAGTGGTTGATCTCGATGGTC 35000 Query 221603 TTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACC 221662 ||||| | |||| |||| ||||| ||| || ||| ||||||| | Sbjct 35001 TTGTTCAAGTTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTG------------ 35048 Query 221663 AACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG---CCAGG 221719 || ||| | |||| || || | | || || | || | | ||||| Sbjct 35049 AAGTCGTAGGTCTCGTTCTCAATGTCAACGTATG---TTGGGAGAGCGATCGAAGCCAGG 35105 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || || || || ||||| || || |||| |||||||| || ||||||||| | Sbjct 35106 TTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAG 35165 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 | ||| || || |||| || || || |||||| ||| ||| |||||||| || Sbjct 35166 CTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGG 35225 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA-GTTCTCTGGC 221898 || || || ||||||||||| ||||||| | || || || ||| | |||| | || Sbjct 35226 ATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAATCTTCTGT-GC 35284 Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAA 221958 || || || ||| | | | ||| | ||| || ||| || ||| | || || Sbjct 35285 GCGGACAGT-CTCACGGCCACGGCCTTG--CTTCTCGTACTGCTCGTAAAGCTTTTCGAA 35341 Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTG 222018 || || ||||| | ||| | || || || ||| ||| ||||| || |||| | Sbjct 35342 CTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGGCACATGAGGGTCCATTC 35401 Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 ||| || | || | || |||||| || || |||||||| || || || || || Sbjct 35402 GCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTC 35461 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 | | || || ||| ||||| ||||| | || |||| || | || | || Sbjct 35462 ACGAGCGCGGACTTCTTCCTTGCCGTGATTTTTGCGGAGGTCCATGAAGGCCAAGACATC 35521 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATC 222198 ||||||||| ||||| || |||| ||| | ||| || || ||||| ||||||||||| | Sbjct 35522 AGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTGCCACCCTGGT- 35580 Query 222199 CACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257 || | | ||| | |||| ||| || || | || ||||||||||||||| | Sbjct 35581 CAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCCGTTGGATGTGC 35640 Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC----ATGCCG 222313 |||| ||||| || |||| ||| | | || | | || ||| | || Sbjct 35641 CGTTCGTGCCTCCGATATACG---AGCCAGTCGCGCGGATGC-GGTGGACGTTGAGACCA 35696 Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373 || || || |||| || ||||||||||| || ||||||||||||| ||| ||||| Sbjct 35697 ATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCCTCG 35756 Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTGGAACA 222432 || ||| ||||| | || | || ||| || || | | ||||| ||| || | | || Sbjct 35757 ATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCATTAGGCGTACCA 35816 Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 ||| | || |||||||| |||||||| ||||| Sbjct 35817 -GCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTA 35851 >seq2106 Length=142898 Score = 170 bits (188), Expect = 4e-37 Identities = 560/863 (65%), Gaps = 36/863 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| ||||||||||||| ||| || || |||||| || || |||||||||||| Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTAT---CCAAAGACGAGCAGCATTT--TCTCA 25591 |||||||| | ||| |||| || || | | ||||||| | || ||||| Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||| | || ||||| || || |||||||| || || |||||||| ||| ||| Sbjct 23326 --CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAGC 23383 Query 25652 GATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| ||| ||||| ||| ||| || || | | || |||||||| |||||||| Sbjct 23384 GTTTCAGCAGTGAAGTACAGATACCTGAAGCACGA-TGCTTCTACGGATTCCAGATCATG 23442 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTC 25770 || || || | ||||| || || || |||| | || ||||| ||| || Sbjct 23443 ATGGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACAT--CAG-CGAA 23499 Query 25771 GCCGAG-AGAGATC--GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 || || || |||| || || |||||||| |||| || | ||| | |||| Sbjct 23500 CCCAAGCAGCGATCATATCTCTTCAACGCCATCGATAACATCCCATGTATCCGTAAGAAG 23559 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || ||||| || |||||| | ||| | || |||| | || ||| | Sbjct 23560 GCTGACTGGGCATTGCGATGGATCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATC 23619 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || || |||||||| ||||| ||||| ||| || ||||| ||| ||||||||||| | Sbjct 23620 GCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTG 23679 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || |||| |||| || || || ||||| | ||| | |||||| Sbjct 23680 AAGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAG 23739 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC-TTC 26066 || | |||| ||| || || |||||||| | | | |||| | |||| || | Sbjct 23740 GGCATGCACACAGACTTCGCGTGCCTGCTGTTCTC---CCACCTCAAGAACAAGCCGGAC 23796 Query 26067 TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126 || | ||| | || |||||| |||||||| | || ||| | || || | Sbjct 23797 GCATCA-CTCGTGCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCAC 23855 Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186 | |||||||| || |||||| |||| ||||| || Sbjct 23856 AGATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGA 23915 Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTAC 26240 || ||| || |||| |||| ||| ||| ||||| ||||| |||||| || Sbjct 23916 GTTTGTCGCAGACCGTCTGTTGT------TGGCACTCGGCAACCAGAAGTTCTACA--AC 23967 Query 26241 GC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298 || | ||||| |||||||| ||||| ||||| || | | || ||||||||||| || Sbjct 23968 GCCACCAACCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTC 24027 Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321 || ||| | || || ||||| || Sbjct 24028 GAGAAGCGTGTTGGTGACTACCA 24050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928814310669440