Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq624 123 3e-23
>seq624
Length=72570
Score = 123 bits (136), Expect = 3e-23
Identities = 274/403 (68%), Gaps = 15/403 (4%)
Strand=Plus/Plus
Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230
||||| | ||| || ||||| || || || |||||||| ||||| |||||||| ||||||
Sbjct 53344 AGATGCTCTGCAACGCCAATCGGTCCAACACCAGGACCACCACCGCCATGTGGGATACAG 53403
Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290
|| ||||| || | || ||||| || |||||||| || |||| || |||
Sbjct 53404 AAAGTCTTGTGCAGGTTGAGATGGCAGACATCTGCGCCGATCTCACCGGGAGAGCAGAGA 53463
Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350
|| | ||| ||||| | || |||||||| | || ||||| ||||||| | ||||||
Sbjct 53464 CCGATCTGAGCATTCATGTTGGCACCATCCATGTAGACCTGGCCACCATACTTGTGAACG 53523
Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410
| | ||| | ||| | ||||||||||| ||| || || || ||||||
Sbjct 53524 AGGTCACAAGCATCCTTGACAGCCGGCTCAAATACACCGAAAGTGGAGGGGTAGGTAATC 53583
Query 138411 ATAATACATGAG---AGTTC--AAATGTA-TTCATGATTGCTTTCTTCTCTAGATCTTTG 138464
||||| || | | ||| |||| ||| || | ||| | || ||||| |
Sbjct 53584 ATAAT---TGCGCCCAATTCGTCCTTGTACTTCTTGCAT--TTTGAT-TCCAGATCCTGC 53637
Query 138465 ATGTCTATGTTGCCA-TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATG 138521
||||| | ||||||| | | |||||||||| | || || ||||||| | ||||
Sbjct 53638 ATGTCCAGGTTGCCAGTGCTGCTGTCACACTTGATAGTGACCACCCTCATTCCGGACATG 53697
Query 138522 ACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCA 138564
| ||| ||||||||| || || || || || |||| ||||
Sbjct 53698 GCCGCAGAAGCAGGATTTGTGCCGTGAGCGGAGACTGGGATCA 53740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578979394377520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |