Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq624 123 3e-23 >seq624 Length=72570 Score = 123 bits (136), Expect = 3e-23 Identities = 274/403 (68%), Gaps = 15/403 (4%) Strand=Plus/Plus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 ||||| | ||| || ||||| || || || |||||||| ||||| |||||||| |||||| Sbjct 53344 AGATGCTCTGCAACGCCAATCGGTCCAACACCAGGACCACCACCGCCATGTGGGATACAG 53403 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290 || ||||| || | || ||||| || |||||||| || |||| || ||| Sbjct 53404 AAAGTCTTGTGCAGGTTGAGATGGCAGACATCTGCGCCGATCTCACCGGGAGAGCAGAGA 53463 Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 || | ||| ||||| | || |||||||| | || ||||| ||||||| | |||||| Sbjct 53464 CCGATCTGAGCATTCATGTTGGCACCATCCATGTAGACCTGGCCACCATACTTGTGAACG 53523 Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 | | ||| | ||| | ||||||||||| ||| || || || |||||| Sbjct 53524 AGGTCACAAGCATCCTTGACAGCCGGCTCAAATACACCGAAAGTGGAGGGGTAGGTAATC 53583 Query 138411 ATAATACATGAG---AGTTC--AAATGTA-TTCATGATTGCTTTCTTCTCTAGATCTTTG 138464 ||||| || | | ||| |||| ||| || | ||| | || ||||| | Sbjct 53584 ATAAT---TGCGCCCAATTCGTCCTTGTACTTCTTGCAT--TTTGAT-TCCAGATCCTGC 53637 Query 138465 ATGTCTATGTTGCCA-TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATG 138521 ||||| | ||||||| | | |||||||||| | || || ||||||| | |||| Sbjct 53638 ATGTCCAGGTTGCCAGTGCTGCTGTCACACTTGATAGTGACCACCCTCATTCCGGACATG 53697 Query 138522 ACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCA 138564 | ||| ||||||||| || || || || || |||| |||| Sbjct 53698 GCCGCAGAAGCAGGATTTGTGCCGTGAGCGGAGACTGGGATCA 53740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578979394377520