Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq635 111 5e-19 seq2050 109 2e-18 seq1895 102 2e-16 >seq635 Length=74236 Score = 111 bits (122), Expect = 5e-19 Identities = 545/864 (63%), Gaps = 5/864 (1%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||| ||||| || || ||| ||||| | ||||||||||| || | | Sbjct 35145 ATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGG 35204 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || |||||||||||||| || ||| | ||| || ||||| |||| || || || || Sbjct 35205 TTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATG 35264 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | || | || | | ||||| | ||| || | | Sbjct 35265 GCGTACCAAATCTTCTGTGCGCGGACAGTCTCACGGCCACGGCCTTGCTTCTCGTACTGC 35324 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 || ||| || | | ||||| ||||| ||| || |||||||||| || |||| Sbjct 35325 TCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGG 35384 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939 || | || | ||| || | ||||||| ||| || | ||| |||| Sbjct 35385 CACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAA 35444 Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCTC 155998 | || |||||||||| | || |||| || | | ||||||||| || || || || Sbjct 35445 AGTGCGAAGAAAAGGTCACGAGCGCG-GACTTCTTCCTTGCCGTGATTTTTGCGGAGGTC 35503 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCT 156058 | ||| || | ||||| || |||||| || || || |||||| |||| | Sbjct 35504 CATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCG 35563 Query 156059 CTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 ||| ||||||||| || || || |||||||| || ||| |||||| ||||| |||| Sbjct 35564 CTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAAC 35623 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 | || ||||| ||||| || || || | |||| ||| |||| | ||| | || Sbjct 35624 CAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCGGTG 35683 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 | | || ||||| || |||| || || || || || ||| | ||| | Sbjct 35684 GACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTC 35743 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | | ||||| || || ||||| | ||| | | | |||| || | |||| Sbjct 35744 GTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGC 35803 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 || || |||||| |||| || || || | || || | || ||||| || ||||| Sbjct 35804 ATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACAT 35863 Query 156356 ATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCT 156415 || | ||| ||||| || ||||| || ||||| || | | || || | Sbjct 35864 GTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACACG 35923 Query 156416 CATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCG 156475 ||| ||| ||||| || |||||| ||| | || ||||| || || ||||| | || Sbjct 35924 CATGATCATCTGCTGTGGTCGCTCTGCAACCTTGCCGTCAATGCGGAGGAGGTACGATCG 35983 Query 156476 TTCCAGAGTTTTAAACCCGAAATA 156499 || | ||| || || || || || Sbjct 35984 CTCTAAAGTCTTGAAGCCAAAGTA 36007 >seq2050 Length=198407 Score = 109 bits (120), Expect = 2e-18 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 ||||||||||| |||||||| | || || || || || ||||| ||||| ||||| Sbjct 60808 CGACGCTGAATGTAACCAGTCTCGGCCGTCTTGACGGCGGTGTCAATGAGACCTTCACGA 60749 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 || ||||| ||||||||||| | ||||| ||| || || | | | ||||| |||| Sbjct 60748 CCTCCCATGGCATGGAAGAAGAACTCTTGTGGTGTCAGTCCACGTAAATAGGAGTTCTCC 60689 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 || || ||||| | | || |||| |||| |||| ||||| || || | || | Sbjct 60688 ACAAATCCACGGGATGCTGGTGAATAGTCGTCTTTGGGGAAGTGCGGAAGCACGCGGTCC 60629 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832 | ||||| |||| | |||||| || |||| | ||| || || | ||| | ||||| Sbjct 60628 TTGAAGCCGAATGGAAGACGCTTGCCTTCAAGGGACTGTTGCCCGACTGACGCAGTCATC 60569 Query 302833 TGCGA 302837 || || Sbjct 60568 TGGGA 60564 >seq1895 Length=176795 Score = 102 bits (112), Expect = 2e-16 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| || |||||||| ||||| || || || || ||||||| ||| ||| |||| Sbjct 158542 TGGGCAATGGTCATACGGGACGGAATGGCGTGTGGGTTAATGATGACGTCTGGTGTCAGG 158601 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| || | || || || || | ||||| || ||||| || Sbjct 158602 CCGTCGGCTGTGAACGGCATGTCTTCTTG-TCGGTATGTGATACCAATTGTGCCCTTCTG 158660 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||||| |||||| |||||||| Sbjct 158661 TCCGTGACGAGAAGCGAACTTGTCACCAAT 158690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471768079776962