Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq635 111 5e-19
seq2050 109 2e-18
seq1895 102 2e-16
>seq635
Length=74236
Score = 111 bits (122), Expect = 5e-19
Identities = 545/864 (63%), Gaps = 5/864 (1%)
Strand=Plus/Plus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||| ||||| || || ||| ||||| | ||||||||||| || | |
Sbjct 35145 ATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGG 35204
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| |||||||||||||| || ||| | ||| || ||||| |||| || || || ||
Sbjct 35205 TTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATG 35264
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| | | | || | || | | ||||| | ||| || | |
Sbjct 35265 GCGTACCAAATCTTCTGTGCGCGGACAGTCTCACGGCCACGGCCTTGCTTCTCGTACTGC 35324
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|| ||| || | | ||||| ||||| ||| || |||||||||| || ||||
Sbjct 35325 TCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGG 35384
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939
|| | || | ||| || | ||||||| ||| || | ||| ||||
Sbjct 35385 CACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAA 35444
Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCTC 155998
| || |||||||||| | || |||| || | | ||||||||| || || || ||
Sbjct 35445 AGTGCGAAGAAAAGGTCACGAGCGCG-GACTTCTTCCTTGCCGTGATTTTTGCGGAGGTC 35503
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCT 156058
| ||| || | ||||| || |||||| || || || |||||| |||| |
Sbjct 35504 CATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCG 35563
Query 156059 CTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115
||| ||||||||| || || || |||||||| || ||| |||||| ||||| ||||
Sbjct 35564 CTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAAC 35623
Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175
| || ||||| ||||| || || || | |||| ||| |||| | ||| | ||
Sbjct 35624 CAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCGGTG 35683
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
| | || ||||| || |||| || || || || || ||| | ||| |
Sbjct 35684 GACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTC 35743
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
| | ||||| || || ||||| | ||| | | | |||| || | ||||
Sbjct 35744 GTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGC 35803
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| || |||||| |||| || || || | || || | || ||||| || |||||
Sbjct 35804 ATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACAT 35863
Query 156356 ATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCT 156415
|| | ||| ||||| || ||||| || ||||| || | | || || |
Sbjct 35864 GTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACACG 35923
Query 156416 CATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCG 156475
||| ||| ||||| || |||||| ||| | || ||||| || || ||||| | ||
Sbjct 35924 CATGATCATCTGCTGTGGTCGCTCTGCAACCTTGCCGTCAATGCGGAGGAGGTACGATCG 35983
Query 156476 TTCCAGAGTTTTAAACCCGAAATA 156499
|| | ||| || || || || ||
Sbjct 35984 CTCTAAAGTCTTGAAGCCAAAGTA 36007
>seq2050
Length=198407
Score = 109 bits (120), Expect = 2e-18
Identities = 171/245 (70%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652
||||||||||| |||||||| | || || || || || ||||| ||||| |||||
Sbjct 60808 CGACGCTGAATGTAACCAGTCTCGGCCGTCTTGACGGCGGTGTCAATGAGACCTTCACGA 60749
Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712
|| ||||| ||||||||||| | ||||| ||| || || | | | ||||| ||||
Sbjct 60748 CCTCCCATGGCATGGAAGAAGAACTCTTGTGGTGTCAGTCCACGTAAATAGGAGTTCTCC 60689
Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772
|| || ||||| | | || |||| |||| |||| ||||| || || | || |
Sbjct 60688 ACAAATCCACGGGATGCTGGTGAATAGTCGTCTTTGGGGAAGTGCGGAAGCACGCGGTCC 60629
Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832
| ||||| |||| | |||||| || |||| | ||| || || | ||| | |||||
Sbjct 60628 TTGAAGCCGAATGGAAGACGCTTGCCTTCAAGGGACTGTTGCCCGACTGACGCAGTCATC 60569
Query 302833 TGCGA 302837
|| ||
Sbjct 60568 TGGGA 60564
>seq1895
Length=176795
Score = 102 bits (112), Expect = 2e-16
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| || |||||||| ||||| || || || || ||||||| ||| ||| ||||
Sbjct 158542 TGGGCAATGGTCATACGGGACGGAATGGCGTGTGGGTTAATGATGACGTCTGGTGTCAGG 158601
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || ||||| ||||| || | || || || || | ||||| || ||||| ||
Sbjct 158602 CCGTCGGCTGTGAACGGCATGTCTTCTTG-TCGGTATGTGATACCAATTGTGCCCTTCTG 158660
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||||| |||||| ||||||||
Sbjct 158661 TCCGTGACGAGAAGCGAACTTGTCACCAAT 158690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471768079776962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |