Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1961 120 3e-22
>seq1961
Length=849494
Score = 120 bits (132), Expect = 3e-22
Identities = 231/337 (69%), Gaps = 3/337 (1%)
Strand=Plus/Plus
Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380
||||| ||||| | || || |||| || |||||| |||||| || || || ||
Sbjct 58623 GTCTCTGGGTTCTTGCAGTCTTTGCACAGAACGAACTTGTTGATGAAGCCGTCGAGGTGG 58682
Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440
||||| | ||| || ||||||| ||||||| ||| | || |||| ||| |||
Sbjct 58683 TCCTGAAGCTTGCTGGCCTCGTGGGCACCGTTGATGATCCAGCGGTCGTCCTTGGGGTCG 58742
Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500
| | || || ||||| || ||| | || |||||||| | || | | ||| ||
Sbjct 58743 ATGTTGGTCTGGGCGCCTAGTTCGAAGCCAAAGTACTTGATGACATAGTTTGGCGGGCGA 58802
Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560
| ||| | ||||| | | || ||||||||||||||||||||| || || |||||
Sbjct 58803 GCCAGCTGGTGGGCGACGTTGCTCAAGTTGACGATGACAGTCTTGATACCATTACCCTTG 58862
Query 34561 CCTTCGACCTTGGCGCAGATG-CGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619
|| || ||||||| | || | ||| ||| |||||||| ||||| | || || ||||
Sbjct 58863 CCCTCAACCTTGG-ACTGAAGACGCTCCATCTTGTAGCGATAGAAGGGATCGGCAACATC 58921
Query 34620 GCGGTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656
||| || ||| || | |||| || | |||||||
Sbjct 58922 GCGACGAATGTTGACGTTGGCCATGGTTG-TGGTGTT 58957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412828387262618
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |