Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1961 120 3e-22 >seq1961 Length=849494 Score = 120 bits (132), Expect = 3e-22 Identities = 231/337 (69%), Gaps = 3/337 (1%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || || |||| || |||||| |||||| || || || || Sbjct 58623 GTCTCTGGGTTCTTGCAGTCTTTGCACAGAACGAACTTGTTGATGAAGCCGTCGAGGTGG 58682 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| || ||||||| ||||||| ||| | || |||| ||| ||| Sbjct 58683 TCCTGAAGCTTGCTGGCCTCGTGGGCACCGTTGATGATCCAGCGGTCGTCCTTGGGGTCG 58742 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || ||||| || ||| | || |||||||| | || | | ||| || Sbjct 58743 ATGTTGGTCTGGGCGCCTAGTTCGAAGCCAAAGTACTTGATGACATAGTTTGGCGGGCGA 58802 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | ||| | ||||| | | || ||||||||||||||||||||| || || ||||| Sbjct 58803 GCCAGCTGGTGGGCGACGTTGCTCAAGTTGACGATGACAGTCTTGATACCATTACCCTTG 58862 Query 34561 CCTTCGACCTTGGCGCAGATG-CGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619 || || ||||||| | || | ||| ||| |||||||| ||||| | || || |||| Sbjct 58863 CCCTCAACCTTGG-ACTGAAGACGCTCCATCTTGTAGCGATAGAAGGGATCGGCAACATC 58921 Query 34620 GCGGTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656 ||| || ||| || | |||| || | ||||||| Sbjct 58922 GCGACGAATGTTGACGTTGGCCATGGTTG-TGGTGTT 58957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828387262618