Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq635 246 3e-60 seq1950 122 8e-23 >seq635 Length=74236 Score = 246 bits (272), Expect = 3e-60 Identities = 1112/1735 (64%), Gaps = 47/1735 (3%) Strand=Plus/Plus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTATCTTCAT 148117 ||| || ||||| || ||||| ||||| ||||||| ||||| ||||| | || Sbjct 34325 CTGATCGATGAATGCACCACGATCAGCAGCCATTTGGACAATGGTTCGCTGACTG---AT 34381 Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177 ||||| | |||||||||| ||||| | ||| || ||| ||||| || | Sbjct 34382 TTCCCACACAGTCTTGTACAATGCCTTGAGGTCATCTGGGATGTTTGGAATGCGTTGAAT 34441 Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237 ||||| | | |||| || | || ||| | || | | || | |||| Sbjct 34442 AGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCTCGGACCAGAGACCACGGTCGAC 34501 Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297 ||||| | || || | | || || ||||| ||||| || || | ||| || || || Sbjct 34502 GAGGTCCTTGAGGAGCCATGGGTTGACAACCTGGAACTCACCAGCCAACACCCGGCG-AG 34560 Query 148298 A-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 | || | |||||| || | || || || |||||||| ||||| || || | || | Sbjct 34561 AGTAAATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATTTGAGAAGTGG 34620 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 || || ||||| || || || || |||||||||| ||| | | || || Sbjct 34621 AAGCAGTTGGCATTGGGGCCACGAGAAGGGAGTTGCGCACCCCGTGCTCAGCGATCCTGG 34680 Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCA 148476 ||| ||||| |||||||||||||| | || || || |||||| ||||| || | Sbjct 34681 CCTTGAGAGCAGCCCAGTCCCAGAGATCAGTTGGAGTGACACCCCACATATCGTATTGAA 34740 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536 | || | || ||| ||||||| ||| || || | | | |||| Sbjct 34741 GTTCACCCTTTGACACTGGTGAGCCTTCGTACGTCTCGTATGGGCCAAGTTTCTCAGCCA 34800 Query 148537 GTTCGCAGCTCGCC-TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC 148595 | || ||| ||| || || ||| | | |||||| ||||| || || |||||| Sbjct 34801 GCTCACAGGACGCAGTCAAG-GCGGCATGGTAAATGGTCTCAAAGATCTGGACGTTGAGT 34859 Query 148596 A---GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652 | ||| ||| | ||| | ||||| || || | || || || || || Sbjct 34860 CTACGTGCCTCCGGAGAG---TCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGA 34916 Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC 148712 ||||| || || | || ||||| ||||| | |||| | ||| |||| | | Sbjct 34917 CCCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTTGCTCTTCCTCGC-CTCTGGCAC 34975 Query 148713 -GGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTC 148770 |||||||||||| |||||| |||||| |||| || | || || ||| | | Sbjct 34976 AGGATAGTGGTTGATCTCGATGGTCTTGTTCAAG-TTCCTGGTGACGAC--TTGAACGAC 35032 Query 148771 TGCGC--AGCAATTCAAAATCGTACTTGTCATCTACGATG-CATCG---GTTC--ACGGC 148822 | || ||| | || ||||| | || | | ||| || || ||| | || Sbjct 35033 TTCGTGAAGCTTCTTGAAGTCGTAGGTCTCGTTCTCAATGTCAACGTATGTTGGGAGAGC 35092 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 ||| || || || ||||| || || |||||| || ||| |||||| | |||||| | Sbjct 35093 GATCGAAGCCAGGTTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGT 35152 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 ||| || ||| || ||| ||| | |||||| || |||||||||| |||||| || Sbjct 35153 GCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGC 35212 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATG 149002 ||||||||||| ||| | || |||||||| || ||| | || | ||| || Sbjct 35213 ATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGG--CGTAC 35270 Query 149003 CAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATAC 149060 || || ||| ||||| || || | || || | || |||||| || Sbjct 35271 CAAATCTTCTGTGCGCGGACAGTCTCACGGCCACGGCCTTGCTTCTCGTACTGCTCGTAA 35330 Query 149061 AGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATG 149120 ||| |||||| ||||||||||| |||| ||||||| ||||||| | ||||||||| Sbjct 35331 AGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGGCACATG 35390 Query 149121 AGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCG 149180 || | ||| |||||| | | | || |||||||| |||||||| || | ||| || ||| Sbjct 35391 AGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCG 35450 Query 149181 TACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACG 149240 | | ||||| || || | ||||| ||| || ||| |||| | | | Sbjct 35451 AAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCCGTGATTTTTGCGGAGGTCCATGAAG 35510 Query 149241 CTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT---G 149297 || | || |||||||| ||||| | ||| | || | || || |||||| | Sbjct 35511 GCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTG 35570 Query 149298 CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCA 149357 || |||||||| |||| ||| | ||||||| | || || | ||| || | | || Sbjct 35571 CCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCCG 35630 Query 149358 CTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTGCACGT 149415 ||| |||||||| || | || ||| ||| ||| || | ||| |||| Sbjct 35631 TTGGATGTGCCGTTCGTGCCTCCGATATACGA--GCCAGTCGCGCGGATGCGGTGGACGT 35688 Query 149416 TGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAG 149474 ||| || ||||| || ||| ||||||||| || || ||| ||| || |||| Sbjct 35689 TGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTT-GAGAGTGTCGTAG 35747 Query 149475 ATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAA 149534 || |||||||||||||| ||||||| | || |||||| ||| | || | | | Sbjct 35748 ATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCATTA 35807 Query 149535 CGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATC 149594 |||| || || ||| | ||||| |||||||| || || || | | ||| Sbjct 35808 GGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACATGTAG 35867 Query 149595 TCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATC 149654 | ||| | ||| | || || || || || || |||||||| | || || ||||| Sbjct 35868 TTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACACGCATG 35927 Query 149655 AGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT--T 149712 | ||| ||||| |||||||| || || ||| |||| ||| | ||| || | | Sbjct 35928 ATCATCTGCTGTGGTCGCTCTGCAACCTTGCCGTCAATGCGGAGGAGGTA--CGATCGCT 35985 Query 149713 CTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 ||| |||||| |||||||||||| ||||| ||||| ||| ||| | | ||||| Sbjct 35986 CTAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGC 36040 >seq1950 Length=170036 Score = 122 bits (134), Expect = 8e-23 Identities = 132/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| ||||||||||| | ||| ||||||||| |||||||| Sbjct 63220 GTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 63161 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| ||||||| |||||||| || ||||| || || |||||||| |||||| ||| Sbjct 63160 GCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGCTCTTC 63101 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | || | ||||||| || ||| || |||| ||||| ||| |||||||||| Sbjct 63100 ACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCA 63046 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||||||| || || | | | |||||||| |||||||| Sbjct 63448 GTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCA-TCCTCGAGTTGCTTGCC 63390 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||||||||| || || || |||||||| ||||| ||| Sbjct 63389 AGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTT 63330 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | | ||| || |||| ||||| ||| || || || || || Sbjct 63329 GACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGT 63270 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 63269 CTTGACAAAGATTTGCAT 63252 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 9/199 (5%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| || ||||| |||| || || || || |||||||||||||| || ||| Sbjct 63676 CTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCG--TCCTCGAGCTGCTTACCAGCG 63619 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | ||||| ||||||||||| || |||||||| |||||||| ||||| ||||| Sbjct 63618 AAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACA 63559 Query 133587 TGCTCAACCGTGTCGG-----TGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | || | ||||| | | || ||| || | |||| || |||||||| || | Sbjct 63558 TTGTCGATGGTGTCTGATGATTCCACTTCACTTCAAGTGTGATAGTCTTGCCGGTGAGTG 63499 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 63498 TCTTGACGAAGATCTGCAT 63480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483404931712240