Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq635 176 4e-39 seq2106 91.5 1e-13 >seq635 Length=74236 Score = 176 bits (194), Expect = 4e-39 Identities = 762/1182 (64%), Gaps = 41/1182 (3%) Strand=Plus/Plus Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 ||| | ||||| || ||| | |||||||| || | |||||||| ||| | ||||| Sbjct 34878 TCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATG 34937 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCG-CTCGCTATGGGATAGTGGTTGCGATCAAT 147365 || || || |||||| | |||| || || | |||||||||||| || || Sbjct 34938 GGGCGGTGACGGAAGTTGCTCTTCCTCGCCTCTGGC-ACAGGATAGTGGTTGATCTCGAT 34996 Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425 ||||||| | ||| | || |||| | | | | || |||| ||| || || Sbjct 34997 GGTCTTGTTCAAGTTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTGAAGTCGTA 35056 Query 147426 AGTCCCGTCTTCGAC----ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 ||| ||| || | ||||| | |||| | ||||| || ||||| ||||||| Sbjct 35057 GGTCTCGTTCTCAATGTCAACGTATG--TTGGGAGA--GCGATCGAAGCCAGGTTGCAGA 35112 Query 147482 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG---CTGCATT 147538 | || ||| || | || ||||| | ||| || | ||| |||||| |||| Sbjct 35113 CAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGA 35172 Query 147539 TTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGT 147598 || || || | || | ||| ||||| || || ||||| || || ||| | || ||| Sbjct 35173 TTGTG---CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGGATGA 35229 Query 147599 ACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTCG 147656 | || ||||| |||||| || | |||| ||| | || || || ||| || || Sbjct 35230 AAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGG-CGTAC-CAAATCTTCTGTGCGCG 35287 Query 147657 CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTC 147716 || || || ||||| | || |||||| ||||||| | | || ||||| || Sbjct 35288 GACAGTCTCACGGCCACGGCCTTGCTTCTCGTACTGCTCGTAAAGCTTTTCGAACTCCTC 35347 Query 147717 GCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTC 147776 ||||||| |||||| || || || |||| || || ||||| || | ||| | ||| Sbjct 35348 GCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGGCACATGAGGGTCCATTCGCCGTT 35407 Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC----GC 147832 | | | ||| || ||| |||||||| || | ||| || ||| | | ||| || || Sbjct 35408 CTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTCACGAGC 35467 Query 147833 GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTT--TCAAATTAAGCACGCTATAGATGTC 147890 ||| | | |||| | || | ||||| || | | ||| || | ||| || Sbjct 35468 GCGGACTTCT-TCCTTGCCGTGATTTTTGCGGAGGTCCA-TGAAG---GCCA-AGACATC 35521 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTC 147947 |||||||| || || | ||||| ||| | ||||| ||||| || |||||||| Sbjct 35522 AGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTGCCACCCTGGTC 35581 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 || | ||| | ||||||| | || || | |||||| |||| ||| | | ||||| Sbjct 35582 AACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCCGTTGGATGTGCC 35641 Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067 ||| ||| ||| | ||| || || | ||| ||||| | |||||||| Sbjct 35642 GTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCGGTGGACGTTGAGACCAATGCC 35701 Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCGTGTAGATGCCGTCGATG 148125 || ||| |||||| || || ||| || | |||||| |||| || |||||| Sbjct 35702 TCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCGT--AGATACCCTCGATG 35759 Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185 ||||| | || | | | | |||||| || || | || | | | |||| || || Sbjct 35760 CTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCATTAGGCGTACCAGCG 35819 Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245 |||||| ||||| ||||| || || | || | ||| | || |||||| Sbjct 35820 CTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACATGTAGTTGTAGGTCTCA 35879 Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305 |||||| | || || || || ||||| ||||| | || || ||||||| ||| |||||| Sbjct 35880 ATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACACGCATGATCATCTGCTGT 35939 Query 148306 GGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT-TTTCGAGGGTTTTGTA 148364 ||||| || ||||| | || || ||| || || | || || | || ||| | Sbjct 35940 GGTCGCTCTGCAACCTTGCCGTCAATGCGGAGGAGGTA-CGATCGCTCTAAAGTCTTGAA 35998 Query 148365 ACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 |||||||||| ||| | || || | ||||| ||||||| Sbjct 35999 GCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGC 36040 >seq2106 Length=142898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 47082 GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTT 47141 ||||| |||||| | || |||||||| || || |||||| | || || |||||| Sbjct 23860 GCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTT 23919 Query 47142 GTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC-GAAATATTTTAATGCTCGTAATCC 47200 || || || ||||||||| || ||||| ||||| ||| | | || || || || Sbjct 23920 GTCGCAGACCGTCTGTTGTTGGCACTCGG-CAACCAGAAGTTCTACAACGCCACCAACCC 23978 Query 47201 GTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGT 47260 || || || ||| | |||||||| || | ||||| ||||| ||||||||||| || || Sbjct 23979 ATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGT 24038 Query 47261 CGGAGAGTA 47269 || || || Sbjct 24039 TGGTGACTA 24047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476595555237360