Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq635 176 4e-39
seq2106 91.5 1e-13
>seq635
Length=74236
Score = 176 bits (194), Expect = 4e-39
Identities = 762/1182 (64%), Gaps = 41/1182 (3%)
Strand=Plus/Plus
Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306
||| | ||||| || ||| | |||||||| || | |||||||| ||| | |||||
Sbjct 34878 TCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATG 34937
Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCG-CTCGCTATGGGATAGTGGTTGCGATCAAT 147365
|| || || |||||| | |||| || || | |||||||||||| || ||
Sbjct 34938 GGGCGGTGACGGAAGTTGCTCTTCCTCGCCTCTGGC-ACAGGATAGTGGTTGATCTCGAT 34996
Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425
||||||| | ||| | || |||| | | | | || |||| ||| || ||
Sbjct 34997 GGTCTTGTTCAAGTTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTGAAGTCGTA 35056
Query 147426 AGTCCCGTCTTCGAC----ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481
||| ||| || | ||||| | |||| | ||||| || ||||| |||||||
Sbjct 35057 GGTCTCGTTCTCAATGTCAACGTATG--TTGGGAGA--GCGATCGAAGCCAGGTTGCAGA 35112
Query 147482 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG---CTGCATT 147538
| || ||| || | || ||||| | ||| || | ||| |||||| ||||
Sbjct 35113 CAGCGACCTCATCTGGAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGA 35172
Query 147539 TTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGT 147598
|| || || | || | ||| ||||| || || ||||| || || ||| | || |||
Sbjct 35173 TTGTG---CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGGATGA 35229
Query 147599 ACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTCG 147656
| || ||||| |||||| || | |||| ||| | || || || ||| || ||
Sbjct 35230 AAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGGATGG-CGTAC-CAAATCTTCTGTGCGCG 35287
Query 147657 CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTC 147716
|| || || ||||| | || |||||| ||||||| | | || ||||| ||
Sbjct 35288 GACAGTCTCACGGCCACGGCCTTGCTTCTCGTACTGCTCGTAAAGCTTTTCGAACTCCTC 35347
Query 147717 GCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTC 147776
||||||| |||||| || || || |||| || || ||||| || | ||| | |||
Sbjct 35348 GCCGTAGACATCGGCGAGACCAGGGCACTCATTGGGGCACATGAGGGTCCATTCGCCGTT 35407
Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC----GC 147832
| | | ||| || ||| |||||||| || | ||| || ||| | | ||| || ||
Sbjct 35408 CTCCTCAACACGCTTCATGAACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTCACGAGC 35467
Query 147833 GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTT--TCAAATTAAGCACGCTATAGATGTC 147890
||| | | |||| | || | ||||| || | | ||| || | ||| ||
Sbjct 35468 GCGGACTTCT-TCCTTGCCGTGATTTTTGCGGAGGTCCA-TGAAG---GCCA-AGACATC 35521
Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTC 147947
|||||||| || || | ||||| ||| | ||||| ||||| || ||||||||
Sbjct 35522 AGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTATTGCCACCCTGGTC 35581
Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007
|| | ||| | ||||||| | || || | |||||| |||| ||| | | |||||
Sbjct 35582 AACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAACCAGTCCGTTGGATGTGCC 35641
Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067
||| ||| ||| | ||| || || | ||| ||||| | ||||||||
Sbjct 35642 GTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCGGTGGACGTTGAGACCAATGCC 35701
Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCGTGTAGATGCCGTCGATG 148125
|| ||| |||||| || || ||| || | |||||| |||| || ||||||
Sbjct 35702 TCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGTGTCGT--AGATACCCTCGATG 35759
Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185
||||| | || | | | | |||||| || || | || | | | |||| || ||
Sbjct 35760 CTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGCTGAGCATTAGGCGTACCAGCG 35819
Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245
|||||| ||||| ||||| || || | || | ||| | || ||||||
Sbjct 35820 CTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTGGACATGTAGTTGTAGGTCTCA 35879
Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305
|||||| | || || || || ||||| ||||| | || || ||||||| ||| ||||||
Sbjct 35880 ATAGCGGCCTCAATATCCTCACCGTGGATGCCAACAGCCACACGCATGATCATCTGCTGT 35939
Query 148306 GGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT-TTTCGAGGGTTTTGTA 148364
||||| || ||||| | || || ||| || || | || || | || ||| |
Sbjct 35940 GGTCGCTCTGCAACCTTGCCGTCAATGCGGAGGAGGTA-CGATCGCTCTAAAGTCTTGAA 35998
Query 148365 ACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
|||||||||| ||| | || || | ||||| |||||||
Sbjct 35999 GCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGC 36040
>seq2106
Length=142898
Score = 91.5 bits (100), Expect = 1e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 47082 GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTT 47141
||||| |||||| | || |||||||| || || |||||| | || || ||||||
Sbjct 23860 GCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTT 23919
Query 47142 GTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC-GAAATATTTTAATGCTCGTAATCC 47200
|| || || ||||||||| || ||||| ||||| ||| | | || || || ||
Sbjct 23920 GTCGCAGACCGTCTGTTGTTGGCACTCGG-CAACCAGAAGTTCTACAACGCCACCAACCC 23978
Query 47201 GTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGT 47260
|| || || ||| | |||||||| || | ||||| ||||| ||||||||||| || ||
Sbjct 23979 ATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGTGT 24038
Query 47261 CGGAGAGTA 47269
|| || ||
Sbjct 24039 TGGTGACTA 24047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476595555237360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |