Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq635 107 2e-18
seq1950 100 3e-16
seq1821 82.4 8e-11
>seq635
Length=74236
Score = 107 bits (118), Expect = 2e-18
Identities = 542/853 (64%), Gaps = 23/853 (3%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| || ||| | |||| ||||| || ||||| ||||| || || ||||| ||||| |
Sbjct 35938 CAGCAGATGATCATGCGTGTGGCTGTTGGCATCCACGGTGAGGATATTGAGGCCGCTATT 35879
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| || ||| | ||||| || | || || |||||||||||||| | || |
Sbjct 35878 GAGACCTACAACTACATGTCCAACAAGTACTTCACACACGCTTCGCCCACGCTTTTCAGC 35819
Query 7684 GCGGGCA---CAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740
|| || | | || | |||| | |||| || |||||| | |||| || |||
Sbjct 35818 GCTGGTACGCCTAATG---CTCAGCTCGCCTCATGCTTTTTGGTCGACATGAAGGATGAC 35762
Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGG 7799
|||||||| || || ||| |||| || | || ||| |||| || || || ||| ||
Sbjct 35761 AGCATCGAGGGTATCTACGACACTCT-CAAGACTTGTGCCATGATCTCAAAGAACGCAGG 35703
Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859
|| || ||||| ||||| || | | ||||| | || |||| ||| ||
Sbjct 35702 AGGCATTGGTCTCAACGTCCACCGCATCCGCGCGACTGGCTCGTATATCGGAGGCACGAA 35643
Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919
||| | | ||| ||| | | |||||| | || || | ||| ||| | | || | ||
Sbjct 35642 CGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGT 35583
Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976
|||||||| || |||||| || || ||||||||| | ||||| ||||||||
Sbjct 35582 TGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGC 35523
Query 7977 GGACATTTACGCAGTGCTAAATCTGCGTCGCAA-CATGGGTTGCGAAGACAGCAAAGCGC 8035
|| | | || | | | || || || || || | ||||| | || |
Sbjct 35522 TGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCAAG-GAAGAAGTCCGCGCTC 35464
Query 8036 GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACG 8095
| || || ||||||| | | ||| | || |||||||| |||| ||| ||| | |||
Sbjct 35463 GTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGAGAACG 35404
Query 8096 CACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAA 8155
||||| | |||||||||||| || |||||| | | || |||||
Sbjct 35403 GCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGGCGAGG 35344
Query 8156 AATTTGAACAATTGTACAAACAATACGA-ACACGACGGCGCGTACGTGCGGCAAGTGAAA 8214
| || ||| | | ||| | || ||||| | | | | || | |||| | | ||
Sbjct 35343 AGTTCGAAAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCGTGAG---ACTGTCC 35287
Query 8215 GCGCGC----GACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTA 8270
|||| | || || |||||| | || ||| | ||| || || || |
Sbjct 35286 GCGCACAGAAGATTTG--GTACGCCATCCTTGAGGCTCAGACCGAGACTGGCGGCCCTTT 35229
Query 8271 CATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTG 8330
||| |||||||| || ||||||||| ||| ||||| || | ||| | ||||| || |
Sbjct 35228 CATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACAATCCG 35169
Query 8331 TTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTG 8390
|| ||| || ||| |||| || | ||||| ||| || || || || || || ||
Sbjct 35168 CAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATGAGGTCGCTGTCTG 35109
Query 8391 CAATCTAGCGTCG 8403
||| || || |||
Sbjct 35108 CAACCTGGCTTCG 35096
>seq1950
Length=170036
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||||| ||||| ||||| ||||| || || ||| | ||| |||
Sbjct 63232 ACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 63173
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| || ||||| || ||||| | |||||||||||| || || || || || || || ||
Sbjct 63172 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGG 63113
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | |||||||| || || || ||||| || ||||| ||
Sbjct 63112 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 63053
Query 134685 CCGGT 134689
|||||
Sbjct 63052 CCGGT 63048
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/235 (69%), Gaps = 5/235 (2%)
Strand=Plus/Minus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
||||| || | || || | ||| | ||| || ||| ||||| || ||||||||||||
Sbjct 63714 TTTCCACCACGCAGACGAAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 63655
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| | || | ||| |||||||| || || || || || | |||||||| || ||
Sbjct 63654 CTCAGTGTCCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGT 63595
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC- 134662
|| ||||| || || |||||||| || ||||| ||| | ||||| || |||||
Sbjct 63594 GGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGATGATTCC 63535
Query 134663 ----CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| || || || || || || ||||| | || || ||||| || |||||
Sbjct 63534 ACTTCACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480
>seq1821
Length=46945
Score = 82.4 bits (90), Expect = 8e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582
||||||| ||||||||||| | ||| | || | || || | ||| || || || ||
Sbjct 19300 CCTTTTGGATGTTGTAGTCAGACAAAG-TGCGGCCATCCTCCAACTGCTTTCCAGCGAAG 19242
Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642
|||| |||||||||||| || || || || || || || || || || ||||| |
Sbjct 19241 ATCAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTG 19182
Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702
|| | ||||||||| || || || || || || ||||| || || || | || || |||
Sbjct 19181 TCGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 19122
Query 134703 AA 134704
||
Sbjct 19121 AA 19120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505381810297520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |