Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq635 107 2e-18 seq1950 100 3e-16 seq1821 82.4 8e-11 >seq635 Length=74236 Score = 107 bits (118), Expect = 2e-18 Identities = 542/853 (64%), Gaps = 23/853 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | |||| ||||| || ||||| ||||| || || ||||| ||||| | Sbjct 35938 CAGCAGATGATCATGCGTGTGGCTGTTGGCATCCACGGTGAGGATATTGAGGCCGCTATT 35879 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||| | ||||| || | || || |||||||||||||| | || | Sbjct 35878 GAGACCTACAACTACATGTCCAACAAGTACTTCACACACGCTTCGCCCACGCTTTTCAGC 35819 Query 7684 GCGGGCA---CAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740 || || | | || | |||| | |||| || |||||| | |||| || ||| Sbjct 35818 GCTGGTACGCCTAATG---CTCAGCTCGCCTCATGCTTTTTGGTCGACATGAAGGATGAC 35762 Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGG 7799 |||||||| || || ||| |||| || | || ||| |||| || || || ||| || Sbjct 35761 AGCATCGAGGGTATCTACGACACTCT-CAAGACTTGTGCCATGATCTCAAAGAACGCAGG 35703 Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859 || || ||||| ||||| || | | ||||| | || |||| ||| || Sbjct 35702 AGGCATTGGTCTCAACGTCCACCGCATCCGCGCGACTGGCTCGTATATCGGAGGCACGAA 35643 Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919 ||| | | ||| ||| | | |||||| | || || | ||| ||| | | || | || Sbjct 35642 CGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGT 35583 Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976 |||||||| || |||||| || || ||||||||| | ||||| |||||||| Sbjct 35582 TGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGC 35523 Query 7977 GGACATTTACGCAGTGCTAAATCTGCGTCGCAA-CATGGGTTGCGAAGACAGCAAAGCGC 8035 || | | || | | | || || || || || | ||||| | || | Sbjct 35522 TGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCAAG-GAAGAAGTCCGCGCTC 35464 Query 8036 GCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACG 8095 | || || ||||||| | | ||| | || |||||||| |||| ||| ||| | ||| Sbjct 35463 GTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGAGAACG 35404 Query 8096 CACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAA 8155 ||||| | |||||||||||| || |||||| | | || ||||| Sbjct 35403 GCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGGCGAGG 35344 Query 8156 AATTTGAACAATTGTACAAACAATACGA-ACACGACGGCGCGTACGTGCGGCAAGTGAAA 8214 | || ||| | | ||| | || ||||| | | | | || | |||| | | || Sbjct 35343 AGTTCGAAAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCGTGAG---ACTGTCC 35287 Query 8215 GCGCGC----GACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTA 8270 |||| | || || |||||| | || ||| | ||| || || || | Sbjct 35286 GCGCACAGAAGATTTG--GTACGCCATCCTTGAGGCTCAGACCGAGACTGGCGGCCCTTT 35229 Query 8271 CATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTG 8330 ||| |||||||| || ||||||||| ||| ||||| || | ||| | ||||| || | Sbjct 35228 CATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACAATCCG 35169 Query 8331 TTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTG 8390 || ||| || ||| |||| || | ||||| ||| || || || || || || || Sbjct 35168 CAGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATGAGGTCGCTGTCTG 35109 Query 8391 CAATCTAGCGTCG 8403 ||| || || ||| Sbjct 35108 CAACCTGGCTTCG 35096 >seq1950 Length=170036 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| ||||| ||||| || || ||| | ||| ||| Sbjct 63232 ACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 63173 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || ||||| | |||||||||||| || || || || || || || || Sbjct 63172 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGG 63113 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||||| || || || ||||| || ||||| || Sbjct 63112 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 63053 Query 134685 CCGGT 134689 ||||| Sbjct 63052 CCGGT 63048 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | ||| | ||| || ||| ||||| || |||||||||||| Sbjct 63714 TTTCCACCACGCAGACGAAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 63655 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | || | ||| |||||||| || || || || || | |||||||| || || Sbjct 63654 CTCAGTGTCCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGT 63595 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC- 134662 || ||||| || || |||||||| || ||||| ||| | ||||| || ||||| Sbjct 63594 GGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGATGATTCC 63535 Query 134663 ----CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || || || || ||||| | || || ||||| || ||||| Sbjct 63534 ACTTCACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480 >seq1821 Length=46945 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||||| ||||||||||| | ||| | || | || || | ||| || || || || Sbjct 19300 CCTTTTGGATGTTGTAGTCAGACAAAG-TGCGGCCATCCTCCAACTGCTTTCCAGCGAAG 19242 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 |||| |||||||||||| || || || || || || || || || || ||||| | Sbjct 19241 ATCAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTG 19182 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||||||| || || || || || || ||||| || || || | || || ||| Sbjct 19181 TCGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 19122 Query 134703 AA 134704 || Sbjct 19121 AA 19120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505381810297520