Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq635 183 4e-41
seq2106 91.5 2e-13
>seq635
Length=74236
Score = 183 bits (202), Expect = 4e-41
Identities = 1126/1779 (63%), Gaps = 49/1779 (3%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGT--CG-GGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGA 110387
|||||||||||||| || ||| ||| | | |||||| |||||||| || |||||||
Sbjct 34186 TGAACTGAATTGGTGCCGAGGCA---GCCATGGTTCGGAGGTAGTACATGCCAGTCTTGA 34242
Query 110388 GTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCA 110447
| || | ||||| | | ||||| | || |||| ||| || || | ||
Sbjct 34243 GACCGAGCTTCCAGCCCGTGAAGTGCATGCTCGTGATCTTGCCCATGGTGGGCTCCTTCA 34302
Query 110448 TGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT--- 110504
|| | ||||| || ||| || || ||||| || || | || ||||| |
Sbjct 34303 TGTGAATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAGCAGCCATTTGGA 34362
Query 110505 CAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564
||||| || | | | |||||||| || || || | ||||| |||||||
Sbjct 34363 CAATGGT-TCGCTGAC--TGATTTCCCACACAGTCTTGTACAATGCCTTGAGGTCATCTG 34419
Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCT 110624
|||| | || || || || || || || | | ||| | | |||||| | ||
Sbjct 34420 GGATGTTTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCT 34479
Query 110625 TGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACT 110684
||||||||||||| | |||||| |||| ||| |||||||| ||||
Sbjct 34480 CGGACCAGAGACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGTTGACAACCTGGAACT 34539
Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744
|||| || | | | ||| ||||| | |||||||| || ||||| || ||
Sbjct 34540 CACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGA 34599
Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804
|||| |||||| | ||||| || ||||||||||| |||| | ||| ||| || |
Sbjct 34600 AGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGGGAGTTGCGCA 34659
Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTC 110862
|| | ||| ||| | |||||||| || ||||||| || || | |||| |
Sbjct 34660 CCCCGTGCTCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGA-GATCAGTTGGAGTG 34718
Query 110863 ACCTTCCCACATGTCAAACTGAAG--CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920
|| ||||||| || | ||||| ||||| ||| || | || || || || | ||
Sbjct 34719 ACAC-CCCACATATCGTATTGAAGTTCACCCTTTG--ACACTGGTGAGCCTTCGTACGTC 34775
Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980
|| || | || | ||||||| |||||| ||| || || || || || |||
Sbjct 34776 TCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCATGGTAAATG 34835
Query 110981 GTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTC----ATCTGAATCAAATGCGTAGC 111035
|| |||||||| | | || | ||| | || || | | ||| ||||| ||
Sbjct 34836 GTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCGAAGGGCATGCGAAGA 34895
Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095
| || || |||| |||||||| || ||||| | ||| || || | ||| || |
Sbjct 34896 GC-----AAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGA 34950
Query 111096 TATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 111154
|| ||| | ||| ||| || ||||| || | || ||| ||| |
Sbjct 34951 AGTTGCTCTTCCTCGCC-TCTGGCACAGGATAGTGGTTGATCTCGATGGTCTTGTTCAAG 35009
Query 111155 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCT 111214
|| |||| || | | || ||| ||||| || | | || | || | || |||
Sbjct 35010 TTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTGAAGTCGTAGGT-CTCGT-TCT 35067
Query 111215 TCATTGACA---TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271
|| || || || |||| || ||||| || |||| ||||| ||||| ||||||
Sbjct 35068 -CAATGTCAACGTATGTTGGGAGAGCGATCGAAGCCAGGTTGCAGACAGCGACCTCATCT 35126
Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331
| | | |||||| | || || || || | |||||| || || || || | |||
Sbjct 35127 GGAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTC 35186
Query 111332 TTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391
|| ||||| ||||| |||||| ||||||||||| || ||| | || || |||||
Sbjct 35187 TTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCG 35246
Query 111392 GTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCG 111450
||||| | | || || || | ||||| | || | || | ||| | | | | ||
Sbjct 35247 GTCTGAGCCTCAAGGATGGCGTACCAAATCTTCTG-TGCGCGGACAGTCTCACGGCCACG 35305
Query 111451 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 111510
|| | | |||||||| ||| || ||| |||||||| || | |||| |||
Sbjct 35306 GCCTTGCTTCTCGTACTGCTCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAG 35365
Query 111511 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCAT 111570
||| || || | || || | || | ||||| || |||||||| ||||||||
Sbjct 35366 ACCAGGGCACTCATTGGGGCACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCAT 35425
Query 111571 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC 111630
||| || ||||| ||||| || | | || || || | | || | ||||| | ||
Sbjct 35426 GAACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCC 35485
Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690
|| || || | || | ||| ||| || ||| |||||||||||||| || ||||
Sbjct 35486 GTGATTTTTGCGGAGGTCCATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGAT 35545
Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747
|| | || || || | ||| | || | || ||||| || ||| ||| |
Sbjct 35546 GGCAAAAGCACCAGGGCGCTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTA 35605
Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805
|| || ||||| |||| | || | ||| || || || || |||| |||||||
Sbjct 35606 GACACGGAGCATGGGAACCAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAG-- 35663
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865
| | || | | |||| || | ||||| || || || |||||||||
Sbjct 35664 CCAGTCGCGCGGATGCGGTGGACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATG 35723
Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925
||||| | | ||||| | |||||||| | ||| ||| ||||| || ||| |
Sbjct 35724 GCACAAGTCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAA 35783
Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985
||||| || | ||| | | || |||||||| |||| || || || | |||||
Sbjct 35784 AAGCATGAGGCGAGCTGAGCATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGT 35843
Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044
|||| ||| | | |||||| | || ||| ||||| | | | ||||| || || ||
Sbjct 35844 GTGAA-GTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACC 35902
Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||||||||| | || || ||||||| ||| | ||||||
Sbjct 35903 GTGGATGCCAACAGCCACACGCATGATCATCTGCTGTGG 35941
>seq2106
Length=142898
Score = 91.5 bits (100), Expect = 2e-13
Identities = 336/517 (65%), Gaps = 22/517 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || |||||||| || ||||||||||| || |||| |||||| |||||
Sbjct 24047 TAGTCACCAACACGCTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATG 23988
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 122483
||||| ||||| || | ||||| | | ||| || | ||||| |
Sbjct 23987 AAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGTGCCAAC-------AA 23935
Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543
||||| || | ||| |||| ||||||| | |||| || | ||||| |||| |||
Sbjct 23934 CAGACGGTCTGCGACAAACTCGATGTACTGGCACATGAGCTTGGCATTCATGCCGAGGAG 23875
Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603
| ||||| || || || ||| ||| |||||| | || ||||| | |||
Sbjct 23874 CATGACGGGGAGCGCATCTGTGAGGAATTCTTGCTCAATTGCGACAGCCTCGACGATGAT 23815
Query 122604 GGCGTGGAT-AGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTC-CACGGC 122660
| || | ||| | || | || | | | || ||| ||| |||| |
Sbjct 23814 GCTCTGCACGAGTGATGC--GTCCGGCTTGTTCTTGAGGTGGGAGAACAGCAGGCACG-C 23758
Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720
|| || ||| | ||||| || || || || | ||| || ||||| ||||| |
Sbjct 23757 GAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAGACCGGC 23698
Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779
||||||||| |||||||||||||| | || | ||| ||| ||||| |||||||||||||
Sbjct 23697 CATGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAACGACCCAGAGAAGAAGATAC 23639
Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACC 122839
|||| ||| || || || | || || ||| |||| | ||| || | ||
Sbjct 23638 CCTCGACAGCAGCGAAAGCGATCAGTCGGCAGGCAAAGGTCGAATTCTTGTCAGAGATCC 23579
Query 122840 ATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGG 122876
|| || |||||| | |||||||| ||||||||
Sbjct 23578 ATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGG 23542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628011384849600
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