Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq635 183 4e-41 seq2106 91.5 2e-13 >seq635 Length=74236 Score = 183 bits (202), Expect = 4e-41 Identities = 1126/1779 (63%), Gaps = 49/1779 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGT--CG-GGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGA 110387 |||||||||||||| || ||| ||| | | |||||| |||||||| || ||||||| Sbjct 34186 TGAACTGAATTGGTGCCGAGGCA---GCCATGGTTCGGAGGTAGTACATGCCAGTCTTGA 34242 Query 110388 GTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCA 110447 | || | ||||| | | ||||| | || |||| ||| || || | || Sbjct 34243 GACCGAGCTTCCAGCCCGTGAAGTGCATGCTCGTGATCTTGCCCATGGTGGGCTCCTTCA 34302 Query 110448 TGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT--- 110504 || | ||||| || ||| || || ||||| || || | || ||||| | Sbjct 34303 TGTGAATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAGCAGCCATTTGGA 34362 Query 110505 CAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564 ||||| || | | | |||||||| || || || | ||||| ||||||| Sbjct 34363 CAATGGT-TCGCTGAC--TGATTTCCCACACAGTCTTGTACAATGCCTTGAGGTCATCTG 34419 Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCT 110624 |||| | || || || || || || || | | ||| | | |||||| | || Sbjct 34420 GGATGTTTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCT 34479 Query 110625 TGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACT 110684 ||||||||||||| | |||||| |||| ||| |||||||| |||| Sbjct 34480 CGGACCAGAGACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGTTGACAACCTGGAACT 34539 Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744 |||| || | | | ||| ||||| | |||||||| || ||||| || || Sbjct 34540 CACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGA 34599 Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804 |||| |||||| | ||||| || ||||||||||| |||| | ||| ||| || | Sbjct 34600 AGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGGGAGTTGCGCA 34659 Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTC 110862 || | ||| ||| | |||||||| || ||||||| || || | |||| | Sbjct 34660 CCCCGTGCTCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGA-GATCAGTTGGAGTG 34718 Query 110863 ACCTTCCCACATGTCAAACTGAAG--CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920 || ||||||| || | ||||| ||||| ||| || | || || || || | || Sbjct 34719 ACAC-CCCACATATCGTATTGAAGTTCACCCTTTG--ACACTGGTGAGCCTTCGTACGTC 34775 Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980 || || | || | ||||||| |||||| ||| || || || || || ||| Sbjct 34776 TCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCATGGTAAATG 34835 Query 110981 GTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTC----ATCTGAATCAAATGCGTAGC 111035 || |||||||| | | || | ||| | || || | | ||| ||||| || Sbjct 34836 GTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCGAAGGGCATGCGAAGA 34895 Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 | || || |||| |||||||| || ||||| | ||| || || | ||| || | Sbjct 34896 GC-----AAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGA 34950 Query 111096 TATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 111154 || ||| | ||| ||| || ||||| || | || ||| ||| | Sbjct 34951 AGTTGCTCTTCCTCGCC-TCTGGCACAGGATAGTGGTTGATCTCGATGGTCTTGTTCAAG 35009 Query 111155 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCT 111214 || |||| || | | || ||| ||||| || | | || | || | || ||| Sbjct 35010 TTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTGAAGTCGTAGGT-CTCGT-TCT 35067 Query 111215 TCATTGACA---TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271 || || || || |||| || ||||| || |||| ||||| ||||| |||||| Sbjct 35068 -CAATGTCAACGTATGTTGGGAGAGCGATCGAAGCCAGGTTGCAGACAGCGACCTCATCT 35126 Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331 | | | |||||| | || || || || | |||||| || || || || | ||| Sbjct 35127 GGAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTC 35186 Query 111332 TTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391 || ||||| ||||| |||||| ||||||||||| || ||| | || || ||||| Sbjct 35187 TTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCG 35246 Query 111392 GTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCG 111450 ||||| | | || || || | ||||| | || | || | ||| | | | | || Sbjct 35247 GTCTGAGCCTCAAGGATGGCGTACCAAATCTTCTG-TGCGCGGACAGTCTCACGGCCACG 35305 Query 111451 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 111510 || | | |||||||| ||| || ||| |||||||| || | |||| ||| Sbjct 35306 GCCTTGCTTCTCGTACTGCTCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAG 35365 Query 111511 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCAT 111570 ||| || || | || || | || | ||||| || |||||||| |||||||| Sbjct 35366 ACCAGGGCACTCATTGGGGCACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCAT 35425 Query 111571 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC 111630 ||| || ||||| ||||| || | | || || || | | || | ||||| | || Sbjct 35426 GAACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCC 35485 Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690 || || || | || | ||| ||| || ||| |||||||||||||| || |||| Sbjct 35486 GTGATTTTTGCGGAGGTCCATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGAT 35545 Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 || | || || || | ||| | || | || ||||| || ||| ||| | Sbjct 35546 GGCAAAAGCACCAGGGCGCTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTA 35605 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805 || || ||||| |||| | || | ||| || || || || |||| ||||||| Sbjct 35606 GACACGGAGCATGGGAACCAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAG-- 35663 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865 | | || | | |||| || | ||||| || || || ||||||||| Sbjct 35664 CCAGTCGCGCGGATGCGGTGGACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATG 35723 Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 ||||| | | ||||| | |||||||| | ||| ||| ||||| || ||| | Sbjct 35724 GCACAAGTCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAA 35783 Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985 ||||| || | ||| | | || |||||||| |||| || || || | ||||| Sbjct 35784 AAGCATGAGGCGAGCTGAGCATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGT 35843 Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044 |||| ||| | | |||||| | || ||| ||||| | | | ||||| || || || Sbjct 35844 GTGAA-GTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACC 35902 Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||||||| | || || ||||||| ||| | |||||| Sbjct 35903 GTGGATGCCAACAGCCACACGCATGATCATCTGCTGTGG 35941 >seq2106 Length=142898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 336/517 (65%), Gaps = 22/517 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| || || |||||||| || ||||||||||| || |||| |||||| ||||| Sbjct 24047 TAGTCACCAACACGCTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATG 23988 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 122483 ||||| ||||| || | ||||| | | ||| || | ||||| | Sbjct 23987 AAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGTGCCAAC-------AA 23935 Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543 ||||| || | ||| |||| ||||||| | |||| || | ||||| |||| ||| Sbjct 23934 CAGACGGTCTGCGACAAACTCGATGTACTGGCACATGAGCTTGGCATTCATGCCGAGGAG 23875 Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603 | ||||| || || || ||| ||| |||||| | || ||||| | ||| Sbjct 23874 CATGACGGGGAGCGCATCTGTGAGGAATTCTTGCTCAATTGCGACAGCCTCGACGATGAT 23815 Query 122604 GGCGTGGAT-AGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTC-CACGGC 122660 | || | ||| | || | || | | | || ||| ||| |||| | Sbjct 23814 GCTCTGCACGAGTGATGC--GTCCGGCTTGTTCTTGAGGTGGGAGAACAGCAGGCACG-C 23758 Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720 || || ||| | ||||| || || || || | ||| || ||||| ||||| | Sbjct 23757 GAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAGACCGGC 23698 Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779 ||||||||| |||||||||||||| | || | ||| ||| ||||| ||||||||||||| Sbjct 23697 CATGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAACGACCCAGAGAAGAAGATAC 23639 Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACC 122839 |||| ||| || || || | || || ||| |||| | ||| || | || Sbjct 23638 CCTCGACAGCAGCGAAAGCGATCAGTCGGCAGGCAAAGGTCGAATTCTTGTCAGAGATCC 23579 Query 122840 ATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGG 122876 || || |||||| | |||||||| |||||||| Sbjct 23578 ATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGG 23542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628011384849600