Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq635 286 4e-72 seq2106 127 3e-24 >seq635 Length=74236 Score = 286 bits (316), Expect = 4e-72 Identities = 1139/1763 (65%), Gaps = 35/1763 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| ||| || ||| | | ||||||||||||||| || |||||||| | Sbjct 34186 TGAACTGAATTGGTGCCGAGGCAGCCATGGTTCGGAGGTAGTACATGCCAGTCTTGAGAC 34245 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||||| | | ||||| | | |||| | ||| || | |||| Sbjct 34246 CGAGCTTCCAGCCCGTGAAGTGCATGCTCGTGATCTTGCCCATGGTGGGCTCCTTCATGT 34305 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 | ||||| || || || ||||||||||| || ||||| || ||||| | | || Sbjct 34306 GAATGTTCAAGCTCTGAGACTGATCGATGAATGCACCACGATCAGCAGCCATTTGGA-CA 34364 Query 117985 CATCCTTCATCT---TGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041 || ||| || ||||||||||||||||| |||| | ||| | |||||||||| Sbjct 34365 -ATGGTTCG-CTGACTGATTTCCCACACAGTCTTGTACAATGCCTTGAGGTCATCTGGGA 34422 Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101 | | || ||| || || ||||| | | ||| | | |||||| | || | Sbjct 34423 TGTTTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCTCGG 34482 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTC 118159 ||||||||||| | ||| |||| | ||| ||| | ||||||| ||||| Sbjct 34483 ACCAGAGACCACGGTCGACGAGGTCCTTGAGGAGCCATGGGT--TGACAACCTGGAACTC 34540 Query 118160 ACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218 ||| || | || | ||| || || ||| | ||||||||||| |||||||| ||| Sbjct 34541 ACCAGCCAACACCCGGCG-AGAGTAAATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGA 34599 Query 118219 TACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 118278 |||| |||||| | ||||| || || ||||| || |||| ||||||| ||| || | Sbjct 34600 AGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGGGAGTTGCGCA 34659 Query 118279 GACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGC--TTTGTCTC 118336 || | || || | |||||||||| ||||||| || || | || | | Sbjct 34660 CCCCGTGCTCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGA-GATCAGTTGGAGTG 34718 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | | ||||||||| | || || ||| | ||| |||| || || || | ||||| Sbjct 34719 ACACC-CCACATATCGTATTGAAGTTCACCCTTTGACACTGGTGAGCCTTCGTACGTCTC 34777 Query 118397 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 118456 |||||||| ||| |||| || || ||| | ||| || || || || || Sbjct 34778 GTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCATGGTAAATGGT 34837 Query 118457 TTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA 118516 ||||| || | | || | | ||||| || || || | | || Sbjct 34838 CTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCGAAGGGCATGCGAAGAGC 34897 Query 118517 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 118576 || || |||| |||||||| |||||||| || || || ||||| || | | || Sbjct 34898 AAGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTTGCT 34957 Query 118577 CTTCCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 118635 ||||| || ||| ||| ||||| || | ||||| | | || | || ||| Sbjct 34958 CTTCCTCGCC-TCTGGCACAGGATAGTGGTTGATCTCGATGGTCTTGTTCAAGTTCCTGG 35016 Query 118636 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGA 118695 |||| || | || ||| |||||||| | | | || | | | || ||| || || Sbjct 35017 TGACGACTTGAACGACTTCGTGAAGCTTCTTGAAGTCGTAGGT-CTCGT-TCT-CAATGT 35073 Query 118696 CA---TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 118752 || || | || || ||||| || ||||| || || |||| | |||||| | | | Sbjct 35074 CAACGTATGTTGGGAGAGCGATCGAAGCCAGGTTGCAGACAGCGACCTCATCTGGAGCGG 35133 Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 |||||| || || || ||||| | ||| || || || ||||| | |||||| || | Sbjct 35134 AGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGT 35193 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 | ||| ||| || ||||||||||| || ||| | || || ||||| || || | Sbjct 35194 TGCTCTTGCGGTTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAG 35253 Query 118873 ACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCT 118931 || || || || | ||| | | || | || | ||||| | | | || || | Sbjct 35254 CCTCAAGGATGGCGTACCAAATCTTCTGT-GCGCGGACAGTCTCACGGCCACGGCCTTGC 35312 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 | |||||||| ||| || ||| ||||| || || | | || | ||| || || Sbjct 35313 TTCTCGTACTGCTCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGG 35372 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051 || || ||||| | ||| | ||||| || ||||||||| ||||||||||| || Sbjct 35373 CACTCATTGGGGCACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGA 35432 Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111 ||||||||||| || || |||| || || ||| ||| ||||||| | || ||||| Sbjct 35433 TCTGGGATCCAAAGTGCGAAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCCGTGATTT 35492 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 || | |||| ||| ||| || ||| |||||||| || || ||||| | || | Sbjct 35493 TTGCGGAGGTCCATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAA 35552 Query 119172 GACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGA 119228 | || || | ||| |||||| || || | |||||| ||| | ||||| Sbjct 35553 GCACCAGGGCGCTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGG 35612 Query 119229 AGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGG 119286 ||||| |||| | || | |||| ||| || || || |||| ||||||| | | | | Sbjct 35613 AGCATGGGAACCAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCC--AGTCG 35670 Query 119287 CTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACT 119346 | | || ||||| || | |||||| || ||||| ||||||||| || || Sbjct 35671 CGCGGATGCGGTGGACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAG 35730 Query 119347 CCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGC 119406 | ||||| || ||||||| || ||||| |||| |||| | ||| | ||||| Sbjct 35731 TCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATG 35790 Query 119407 TCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACA 119466 | | |||| | || ||||||||| |||| || || || | ||||| |||| Sbjct 35791 AGGCGAGCTGAGCATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAA-G 35849 Query 119467 TACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATA 119525 ||| | | |||||| | || ||||||||| | |||| ||| || || ||||| || Sbjct 35850 TACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATG 35909 Query 119526 CCGATCGAGACCCGCATAAACAT 119548 || | | || ||||| | ||| Sbjct 35910 CCAACAGCCACACGCATGATCAT 35932 >seq2106 Length=142898 Score = 127 bits (140), Expect = 3e-24 Identities = 338/507 (67%), Gaps = 17/507 (3%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||||||||| ||||| | ||| |||||||| ||||| | ||||||||| |||||| Sbjct 23741 CCCTCGTCACGCGAGATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTC 23682 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 ||||||||||| || | || || |||||||||||||| ||||| ||| ||||| Sbjct 23681 TTCAACCAGAAGATGGACGCGAACGACCCAGAGAAGAAGATACCCTCGACAGCAGCGAAA 23622 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA---AACCACTTCATCGCCCAC 130210 || | || || ||||||| || || | ||| | ||| || ||||| Sbjct 23621 GCGATCAGTCGGCAGGCAAAGG---TCGAATTCTTGTCAGAGATCCATCGCAATGCCCAG 23565 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | ||||| || |||||| |||| | | | ||| || | ||||| | | | || Sbjct 23564 TCAGCCTTCTTACGGATACATGGGATGTTATCGATGGCGTTGAAGAGAT--ATGATCGCT 23507 Query 130271 GAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-T 130327 | | || || ||||||| | || || || || |||||||| |||| | | Sbjct 23506 GCTTGGGTTCGCTGATGTAGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCT 23447 Query 130328 TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGC- 130386 ||| || | ||| | ||||||| | || ||||| ||||||||| ||| |||| Sbjct 23446 CCATCAT-GATCTGGAATCCGTAGAAGCATCGTGCTTCAGGTATCTGTACTTCA-CTGCT 23389 Query 130387 AAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGAT 130446 ||| | | | ||||| ||||||||||| || | || || || || |||| Sbjct 23388 GAAACGCTCAACCAGGTTCTCGTTGACAATTCCATCAGATGCGGCGAAGAAAGCAAGGAC 23329 Query 130447 ATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTC---TTCCAGTCGTCAAGATCCTT 130503 | ||||| | | || | ||||||| || |||||||||| ||| ||||| Sbjct 23328 GTGTGAGATGAAGTATCGCTCGTCATCGTTCAATCTCTTGTTCCAGTCGTGAAGGTCCTT 23269 Query 130504 CGAGAGATCTACCTCCTCCGCAGTCCA 130530 || ||||| | |||||| |||||||| Sbjct 23268 GGACAGATCAATCTCCTCAGCAGTCCA 23242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618414899864560