Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq635 298 6e-76 seq2106 109 6e-19 seq2050 102 1e-16 seq2494 95.1 1e-14 >seq635 Length=74236 Score = 298 bits (330), Expect = 6e-76 Identities = 1157/1787 (65%), Gaps = 37/1787 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||| ||||||| ||||| | || || || || || || ||||| | | Sbjct 35941 CCACAGCAGATGATCATGCGTGTGGCTGTTGGCATCCACGGTGAGGATATTGAGGCCGCT 35882 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | |||||| | | ||| |||| ||||| | || || || || Sbjct 35881 ATTGAGACCTACAACTACATGTCCAACAAGTAC-TTCACACACGCTTCGCCCACGCTTTT 35823 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || |||||||| || | | || | || ||||| | ||| || ||||| || Sbjct 35822 CAGCGCTGGTACGCCTAATGCTCAGCTCGCCTCATGCTTTTTGGTCGACATGAAGGATGA 35763 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | |||||||| | ||||| | | ||||| ||||||||| || || Sbjct 35762 CAGCATCGAGGGTATCTACGACACTCTCAAGACTTGTGCCATGATCTCAAAGAACGCAGG 35703 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 || ||||| | || |||| | | || | | ||||||| |||| || || Sbjct 35702 AGGCATTGGTCTCAACGTCCACCGCATCCGCGCGACTGG--CTCGTATATCGGAGGCACG 35645 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || ||| | || | |||| ||||| || || | ||| ||| || ||||| Sbjct 35644 AACGGCACATCCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTAC 35585 Query 104579 GTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 || | || | ||| | || || || | || |||| || |||||||||||| Sbjct 35584 GTTGACCAGGGTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATGGCAC 35525 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGGT 104693 || ||| || ||| ||| | || | || || || || | || || | |||| | Sbjct 35524 GCTGATGTCTTGGCCTTCATGGACCTCCGCAAAAATCACGGCAAGGAAGAAGTCCGCGCT 35465 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || || || |||| ||| || ||||| |||||||| ||||||||| | |||||||||| Sbjct 35464 --CGTGACCTTTTCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGAGA 35407 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | ||| | || || | || ||||||||| |||||| | || | Sbjct 35406 ACGGCGAATGGACCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGGCG 35347 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 ||||||| ||| |||||| |||||||| | |||| || | || ||| || | Sbjct 35346 AGGAGTTCGAAAAGCTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCGTGAGACTGTCC 35287 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 || | || | | ||| | || || || || |||| ||||||||||| || | | Sbjct 35286 GCGCA-CAGAAGATTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGCGGCCCTTTC 35228 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 || || ||||| || || || |||| ||||| || || ||||| | || ||| Sbjct 35227 ATCCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACAATCCGC 35168 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 || ||||| ||||| || || ||| | || | | | ||||||| ||||| || Sbjct 35167 AGCTCCAACCTCTGCACTGAGATCATTGAGTACTCCGCTCCAGATGAGGTCGCTGTCTGC 35108 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 105112 ||||| || || ||||||||||| | || || || |||| |||| | || | Sbjct 35107 AACCTGGCTTCGATCGCTCTCCCAACATACGTTGACATTGAGAACGAGACCTACGACTTC 35048 Query 105113 GAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGA 105172 | || || |||||||| || ||||||| ||| | |||| || || | Sbjct 35047 AAGAAGCTTCACGAAGTCGTTCAAGTCGTCACCAGGAACTTGAACAAGACCATCGAGATC 34988 Query 105173 AATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 || || || || ||| || | || || | | ||||| || || ||||| Sbjct 34987 AACCACTATCCTGTGCCAGA-GGCGAGGAAGAGCAACTTCCGTCACCGCCCCATCGGTCT 34929 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291 ||||| ||||||||||| |||| ||| || | |||| | || || | | || Sbjct 34928 TGGTGTCCAGGGTCTCGCTGATGCCTTCCTTGCTCTTCGCATGCCCTTCGACT-CTCCGG 34870 Query 105292 AGCGAAGGA-AATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCG 105349 || | | | | |||| | | || ||||||||||| || || ||||| ||||| ||| Sbjct 34869 AGGCACGTAGACTCAACGTCCAGATCTTTGAGACCATTTACCATGCCGC-CTTGACTGCG 34811 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 | ||| |||| ||| ||| ||||| || || | || || || |||| ||| Sbjct 34810 TCCTGTGAGCTGGCTGAGAAACTTGGCCCATACGAGACGTACGAAGGCTCACCAGTGTCA 34751 Query 105410 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGG 105467 | || | ||||||| |||||||||| || | |||| || || || ||||||| Sbjct 34750 AAGGGTGAACTTCAATACGATATGTGGG-GTGTCACTCCAA-CTGATCTCTGGGACTGGG 34693 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 |||||||||| | ||| ||| | || | || ||| || ||| |||| |||| Sbjct 34692 CTGCTCTCAAGGCCAGGATCGCTGAGCACGGGGTGCGCAACTCCCTTCTCGTGGCCCCAA 34633 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 ||||||| || ||||| | |||||| |||| || || ||||| || || ||||| | Sbjct 34632 TGCCAACTGCTTCCACTTCTCAAATCATGGGCTTCAACGAGTGCTTCGAGCCATACACTA 34573 Query 105588 CGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--C 105644 ||||| || ||| | | | || || ||||| | |||||||| ||| | Sbjct 34572 GCAACATTTACTCT-CGCCGGGTGTTGGCTGGTGAGTTCCAGGTTGTCAAC--CCATGGC 34516 Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 105704 || | | |||||| || ||||||||||||| || | |||||| | | ||| | Sbjct 34515 TCCTCAAGGACCTCGTCGACCGTGGTCTCTGGTCCGAGAACATGAAGAACCGCATCATTG 34456 Query 105705 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACC 105764 | ||||| || |||||| ||| | || ||| |||| | ||| |||||| Sbjct 34455 CCGATGGTGGCTCTATTCAACGCATTCCAAACATCCCAGATGACCTCAAGGCATTGTACA 34396 Query 105765 GCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCCGCAGATCGTGGTC 105821 || || |||||||||| | | || ||||| | ||||| || ||||||||| Sbjct 34395 AGACTGTGTGGGAAATCA--GTCAGCGA-ACCATTGTCCAAATGGCTGCTGATCGTGGTG 34339 Query 105822 GCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGC 105881 ||||| ||||| ||| || |||| | |||| | || || ||| |||| Sbjct 34338 CATTCATCGATCAGTCTCAGAGCTTGAACATTCACATGAAGGAGCCCACCATGGGCAAGA 34279 Query 105882 TCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCC 105941 || | |||||| | | |||||| |||||||| || || ||||| ||||||| Sbjct 34278 TCACGAGCATGCACTTCACGGGCTGGAAGCTCGGTCTCAAGACTGGCATGTACTACCTCC 34219 Query 105942 GATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAA 105988 || | | ||| || ||||||||||||| | | || | |||| Sbjct 34218 GAACCATGGCTGCCTCGGCACCAATTCAGTTCACTGTCGACCAAGAA 34172 >seq2106 Length=142898 Score = 109 bits (120), Expect = 6e-19 Identities = 177/248 (71%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCA-AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAA 94772 ||||| | |||||| | |||| | || ||||| | ||||| || || ||||| || Sbjct 23518 CTCTTCAACGCCATCGATAACA-TCCCATGTATCCGTAAGAAGGCTGACTGGGCATTGCG 23576 Query 94773 GTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGT 94829 ||| | ||| | || ||| ||||||| ||||| |||| || || ||| Sbjct 23577 ATGGATCTCTGACAAGAATTCGA---CCTTTGCCTGCCGACTGATCGCTTTCGCTGCTGT 23633 Query 94830 TGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTC 94888 |||||||||||||||||||| || ||| ||| | || | ||| | |||||||| |||| Sbjct 23634 CGAGGGTATCTTCTTCTCTGGGTCGTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTC 23692 Query 94889 TCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAG 94948 ||||| | |||||| ||||| ||||| | ||||| ||||||||||| | ||| || Sbjct 23693 TCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGGCATGCACACAG 23752 Query 94949 AGTTTGCG 94956 | || ||| Sbjct 23753 ACTTCGCG 23760 >seq2050 Length=198407 Score = 102 bits (112), Expect = 1e-16 Identities = 224/327 (69%), Gaps = 14/327 (4%) Strand=Plus/Plus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||||||||| |||| ||| ||| ||||||||||||| | | ||||| Sbjct 116270 AGACCCTTGATGTGGGAACCATCGTGATCCTGATCGGTCATGATCATGATATGTCCATAT 116329 Query 169229 CGAAG--CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA 169286 || || ||| | ||| || || || ||||| ||||| | || |||||||| Sbjct 116330 CGCAGACCTCTG--GTATCGGTGTATTCTTTCTTGTGTTGGAGACCGATGAACTTCTTGA 116387 Query 169287 -GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTT 169344 | || |||| |||||| || | || ||| ||||| |||||||| || || Sbjct 116388 TGTTC--TGAATCTCTTGATTCTTCGAGATCTGATCAACAGATGCATCGCGGACGTTGAG 116445 Query 169345 ACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGC 169404 ||| ||||| ||||||||||| ||| | || || || || | |||| || Sbjct 116446 CACCTTACCACGCAGAGGGAAGACTCCGAACAAGTCGGGATTGACCACAGCACGACCAGC 116505 Query 169405 GACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTT---TCCAGA 169461 | |||||| | |||||||||||||| || | || || || ||||| ||| Sbjct 116506 CAGGGCGAGAAGCGCGGCCGAGTCACCCTCAGTCAAGACTAGAGTGCATTTGTGACCATC 116565 Query 169462 TTGTGCCGTACCCGCCTTGTTCGCATC 169488 | || ||||| |||||||| ||||| Sbjct 116566 CT-TG--GTACCAGCCTTGTTGGCATC 116589 >seq2494 Length=314816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 |||||| | ||||||||| || |||||||||| |||||| ||| ||| | || ||| Sbjct 149797 CTTTCCGATGGCATCAATTTCGTCAATGAAGATGATGCAAGGTGTATTCTTTCGGGCGTT 149856 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813 | || ||||| | ||||| | | |||||||| || |||||||| || || | | Sbjct 149857 CGCGAACAGATCTCTCACACGGCTAGGACCCACACCTACGAACATCTCTACGAATTCGGA 149916 Query 9814 GGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9873 | || || |||||| || ||| || || ||| | || ||| | ||||| Sbjct 149917 ACCAGAGACGGAGAAGAAGGGCACTCCAGACTCTCCTGCAGTAGCCTTGGCCAACAGAGT 149976 Query 9874 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 |||||| ||||| || || | |||| |||||| ||||| || ||||| ||| Sbjct 149977 CTTACCGGTACCGGGAGGTCCAGAAAGGATGGCACCGCGTGGGATTTTGGCACCA 150031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583241654464240