Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq635 306 4e-78 seq2106 89.7 6e-13 >seq635 Length=74236 Score = 306 bits (338), Expect = 4e-78 Identities = 913/1401 (65%), Gaps = 26/1401 (2%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 |||||| || |||| |||||| ||| |||||| | ||||| |||||||| ||| Sbjct 34535 GAACTCACCAGCCAACACCCGGCGAGAGTAAATGTTGCTAGTGTATGGCTCGAAGCACTC 34594 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||| |||||||| || | || || || || ||||| || || || || || || || Sbjct 34595 GTTGAAGCCCATGATTTGAGAAGTGGAAGCAGTTGGCATTGGGGCCACGAGAAGGGAGTT 34654 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAG----GCC--GTCCCAAAATTCATTCGC 78680 || | || ||| |||| | |||| || ||| |||||| | ||| | | Sbjct 34655 GCGCACCCCGTGCTCAGCGATCCTGGCCTTGAGAGCAGCCCAGTCCCAGAGATCAGTTGG 34714 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | || |||||||| || |||||| ||||| ||| | || || || | | |||| Sbjct 34715 AGTGACACCCCACATATCGTATTGAAGTTCACCCTTTGACACTGGTGAGCCTTCGTACGT 34774 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 |||||| | || | || || || || || ||| | || ||| || ||||| | Sbjct 34775 CTCGTATGGGCCAAGTTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCATGGTAAAT 34834 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCC--G 78858 | ||| ||||| |||||| || |||| | |||||| | | || | Sbjct 34835 GGTCTCAAAGATCTGGACGTTGAGTCTACGTGCCTCCGGAGAGTCGAAGGGCATGCGAAG 34894 Query 78859 AGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATG 78918 |||| | |||| |||| || || |||||||| || | | |||| || ||||| || | | Sbjct 34895 AGCA--AGGAAGGCATCAGCGAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGAAG 34952 Query 78919 TTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAAGTTCCGATCGATGACGCGGTTCAGG 78975 |||||||| | |||||| | | || || ||| |||||| ||||| | Sbjct 34953 TTGCTCTTCCT---CGCCTCTGGCACAGGATAGTGGTTGATCTCGATGGTCTTGTTCAAG 35009 Query 78976 TTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTG 79035 || | |||||||| || || |||| | || ||| || | | | || || Sbjct 35010 TTCCTGGTGACGACTTGAACGACTTCGTGAAGCTTCTTGAAGTCGTA--GGTCTCGTTCT 35067 Query 79036 --ATG--AAAGTCGGTAGGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCG 79087 ||| || || || || | |||||| ||||||||||| || || ||| || | Sbjct 35068 CAATGTCAACGTATGTTGGGAGAGCGATCGAAGCCAGGTTGCAGACAGCGACCTCATCTG 35127 Query 79088 GGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCT 79147 | || ||| ||||| || ||||| | || || ||| ||||| | ||||| Sbjct 35128 GAGCGGAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCT 35187 Query 79148 TCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAA 79207 ||||||||||||| ||| || || |||||||| ||| | || || ||||| Sbjct 35188 TCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGG 35247 Query 79208 CCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGAC 79267 |||| || || | | ||| ||| || | | | || |||||| || | || | Sbjct 35248 TCTGAGCCTCAAGGATGGCGTACCAAATCTTCTGTGCGCGGACAGTCTCACGGCCACGGC 35307 Query 79268 CCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGC 79327 | || ||||| | ||| | || | ||| |||| || |||||||||| || | Sbjct 35308 CTTGCTTCTCGTACTGCTCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGAC 35367 Query 79328 CCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGA 79387 | |||||||| | |||||||| ||| ||| || ||| || |||||| || ||||| Sbjct 35368 CAGGGCACTCATTGGGGCACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGA 35427 Query 79388 AGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCT 79447 | || || |||||||| || || ||| ||||| || || | || || | ||| | Sbjct 35428 ACAGATCTGGGATCCAAAGTGCGAAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCCGT 35487 Query 79448 GGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGG 79507 | || || || || | ||| ||| || || |||||||| ||||| || ||||||| Sbjct 35488 GATTTTTGCGGAGGTCCATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGG 35547 Query 79508 CGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAA 79567 | || | ||| |||||| ||| ||||||| ||||| || || ||||||||| | | Sbjct 35548 CAAAAGCACCAGGGCGCTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGA 35607 Query 79568 CTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGC 79627 | ||||||||||| || | |||| || ||||||||| || ||| | || Sbjct 35608 CACGGAGCATGGGAACCAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAG 35667 Query 79628 TCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGC 79687 |||| || ||| | || || || ||||| || | ||| ||||| || | Sbjct 35668 TCGCGCGGATGCGGTGGACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCAC 35727 Query 79688 ACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC 79747 | |||||| || |||||||| |||||||| ||| |||||||| |||||| |||| Sbjct 35728 AAGTCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGC 35787 Query 79748 AGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGA 79807 | | | ||| | || |||||| ||| |||| || || |||| ||||| |||| Sbjct 35788 ATGAGGCGAGCTGAGCATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGA 35847 Query 79808 AGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGA 79867 || |||| | | ||| | ||| ||||| | || | | || || ||||||| Sbjct 35848 AGTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGA 35907 Query 79868 TGCCGACCGCGACGCGCATGA 79888 |||| || || || ||||||| Sbjct 35908 TGCCAACAGCCACACGCATGA 35928 Score = 269 bits (298), Expect = 3e-67 Identities = 1112/1731 (64%), Gaps = 47/1731 (3%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171 ||||||| || || || |||||||| || || || | ||| |||| ||||| Sbjct 35928 TCATGCGTGTGGCTGTTGGCATCCACGGTGAGGATATT----GAGGCCGCTATTGAGACC 35873 Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231 ||| || ||| | | |||| |||||| ||||| |||| || ||||||| ||| ||| Sbjct 35872 TACAACTACATGTCCAACAAGTACTTCACACACGCTTCGCCCACGCTTTTCAGCGCTGGT 35813 Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291 ||| || | ||| | | || || | || | ||||||||||||||||| ||| Sbjct 35812 ACGCCTAATGCTCAGCTCGCCTCATGCTTTTTGGTCGACATGAAGGATGACAGCATCGAG 35753 Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 || |||||||| || |||||| || || ||||| ||| | || || || || Sbjct 35752 GGTATCTACGACACTCTCAAGACTTGTGCCATGATCTCAAAGAACGCAGGAGGCATTGGT 35693 Query 19352 ATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 || || | ||||| ||| ||| | ||| || |||||||| | || Sbjct 35692 CTCAACGTCCACCGCATCCGCGCGACTGGCTCGTATATCGGAGGCACGAACGGCACATCC 35633 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 |||| | || || |||||||| |||| ||||||||| || | ||||| ||||||| Sbjct 35632 AACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTTGACCAGGGT 35573 Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 ||| || ||| || | || |||||||||||||||||||||||||| || ||| || Sbjct 35572 GGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCTGATGTCTTG 35513 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 | ||| | || || ||| || || || | || || | ||| ||| ||||| ||| Sbjct 35512 GCCTTCATGGACCTCCGCAAAAATCACGGCAAGGAAGAAGTCCGCGCTCGTGACCTTTTC 35453 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 || | ||||| || || || |||||| || |||||| || ||| |||||| | Sbjct 35452 TTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGAGAACGGCGAATGGACC 35393 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711 || |||||||| | || |||||||| || |||| ||||||||||||| |||| | || Sbjct 35392 CTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGGCGAGGAGTTCGAAAAG 35333 Query 19712 TTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771 | ||| | |||| || ||||| | || ||||| || | | | | Sbjct 35332 CTTTACGAGCAGTACGAGAAGCAAGGCCGTGGCCGTGAGACTGTCCGCGCACAGAAGATT 35273 Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGAC 19831 ||| || | |||| | ||| |||||| ||| || | ||| |||||||| Sbjct 35272 TGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGCGGCCCTTTCATCCTGTACAAGGAT 35213 Query 19832 GCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGT 19891 || ||| |||| || ||||||||| | ||| | ||| |||||||| || Sbjct 35212 GCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACAATCCGCAGCTCCAACCTCTGC 35153 Query 19892 ACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTG 19951 ||||| ||||| ||| ||| || || ||| || || || || ||||| || | Sbjct 35152 ACTGAGATCATTGAGTACTCCGCTCCAGATGAGGTCGCTGTCTGCAACCTGGCTTCGATC 35093 Query 19952 TGCCTGCCGACTTTCGT---CA---AGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAG 20005 || || || | ||| || || | ||| |||||| || | |||| Sbjct 35092 GCTCTCCCAACATACGTTGACATTGAGAACGAGACCTACGACTTCAAGAAGCTTCACGAA 35033 Query 20006 GTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCGAC 20064 || | |||||||| | || |||| |||||| ||| || || | Sbjct 35032 GTCGTTCAAGTCGTCACCAGGAACTTGAACAAGACCATCGAGATCAACCACTATCCTGTG 34973 Query 20065 CGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCT 20124 | | | |||| | ||| || | || ||||| || |||| | || |||||||| || Sbjct 34972 CCA-GAGGCGAGGAAGAGCAACTTCCGTCACCGCCCCATCGGTCTTGGTGTCCAGGGTCT 34914 Query 20125 GGCCGACGTTTTCATGATGCTC--GGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTC 20182 || || | ||| | ||||| || | | |||||| ||| |||| || ||| Sbjct 34913 CGCTGATGCCTTCCT--TGCTCTTCGCATGCCCTTCGACTCTCCGGAGGCACGTAGACTC 34856 Query 20183 AACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCC 20242 ||| ||||| ||| || | ||||| || ||| | | || || || || || Sbjct 34855 AACGTCCAGATCTTTGAGACCATTTACCATGCCGCCTTGACTGCGTCCTGTGAGCTGGCT 34796 Query 20243 AAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAG 20302 | | ||||| |||||||||| | | || || || | ||| ||||| || || Sbjct 34795 GAGAAACTTGGCCCATACGAGACGTACGAAGGCTCACCAGTGTCAAAGGGTGAACTTCAA 34736 Query 20303 CCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC------GCCCTCAAGGTTGAG 20356 || |||||||| |||||| | ||| | ||| | || ||||||| | Sbjct 34735 TACGATATGTGGGGTGTCACTCCAACTGATCTCTGGGACTGGGCTGCTCTCAAGGCCAGG 34676 Query 20357 ATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACC 20416 ||| |||||| | |||||||| | ||||| || || ||||| || || || || Sbjct 34675 ATCGCTGAGCACGGGGTGCGCAACTCCCTTCTCGTGGCCCCAATGCCAACTGCTTCCACT 34616 Query 20417 GCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGT 20476 | || |||||||| ||||||| |||||||| ||||| | |||||| |||| || Sbjct 34615 TCTCAAATCATGGGCTTCAACGAGTGCTTCGAGCCATACACTAGCAACATTTACTCTCGC 34556 Query 20477 CGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGG-TCCGCGA----CTTGC 20531 || |||| ||||||||| || ||| ||| | | ||| ||| | | || | Sbjct 34555 CGGGTGTTGGCTGGTGAGTTC--CA-GGTTGTCAA-CCCATGGCTCCTCAAGGACCTCGT 34500 Query 20532 AGAAGATCGATATGTGGTCGCCCAAAATTAAGAA-TGAA--ATTGTCCGA-GCCGGCGGG 20587 || | | | | ||||| || || ||||| | | |||| |||| | ||| Sbjct 34499 CGACCGT-GGTCTCTGGTCCGAGAACATGAAGAACCGCATCATTG-CCGATGGTGGCTCT 34442 Query 20588 AGCGTCCAGGCATTGGATATCCCCCAGA--ACCTCAAGGACATT-TACAGGACCGTATGG 20644 | || | ||||| | | |||||| ||||||||| |||| |||| ||| || ||| Sbjct 34441 A--TTCAACGCATTCCAAACATCCCAGATGACCTCAAGG-CATTGTACAAGACTGTGTGG 34385 Query 20645 GAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAG 20704 |||||| ||| | ||| || | ||||| || ||||| || || | |||||| ||| Sbjct 34384 GAAATCAGTCAGCGAACCATTGTCCAAATGGCTGCTGATCGTGGTGCATTCATCGATCAG 34325 Query 20705 TCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCAT 20764 || ||| | || | |||| || | || | | ||| ||| | | |||||| Sbjct 34324 TCTCAGAGCTTGAACATTCACATGAAGGAGCCCACCATGGGCAAGATCACGAGCATGCAC 34265 Query 20765 ATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | |||||| | || |||||||| ||||||||||| || || ||| Sbjct 34264 TTCACGGGCTGGAAGCTCGGTCTCAAGACTGGCATGTACTACCTCCGAACC 34214 >seq2106 Length=142898 Score = 89.7 bits (98), Expect = 6e-13 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 59982 CGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTAT 60040 || || || ||||| || ||| || || || |||||||||||||| |||||| | || Sbjct 23611 CGACTGATCGCTTTCGC-TGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCAT 23669 Query 60041 TTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTC 60100 |||||| | || |||||||| |||||| | || || | ||||| ||||| |||| || Sbjct 23670 CTTCTGGTTGAAGAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTC 23729 Query 60101 CCGGGACGAGGGC 60113 || ||||||||| Sbjct 23730 GCGTGACGAGGGC 23742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548506794673440