Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq635 232 7e-56 seq2106 104 3e-17 seq2050 95.1 1e-14 >seq635 Length=74236 Score = 232 bits (256), Expect = 7e-56 Identities = 411/595 (69%), Gaps = 12/595 (2%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCG----TGAGACG 53248 ||||||| || || | || ||||||||||| || || | | ||| |||||| Sbjct 35928 TCATGCGTGTGGCTGTTGGCATCCACGGTGAGGA-TATT---GAGGCCGCTATTGAGACC 35873 Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308 ||| ||| ||| | | |||||||| || ||||| |||| || || |||| ||||||| Sbjct 35872 TACAACTACATGTCCAACAAGTACTTCACACACGCTTCGCCCACGCTTTTCAGCGCTGGT 35813 Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368 ||| | | ||||| | | ||||| |||| | |||||||||||| ||||| Sbjct 35812 ACGCCTAATGCTCAGCTCGCCTCATGCTTTTTGGTCGACATGAAGGATGACAGCATCGAG 35753 Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 || |||||||| || |||||| |||||| ||||| ||| | || || || ||| Sbjct 35752 GGTATCTACGACACTCTCAAGACTTGTGCCATGATCTCAAAGAACGCAGGAGGCATTGGT 35693 Query 53429 ATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCG 53486 || || || | || |||| |||| ||| | ||| || ||||||||| Sbjct 35692 CTCAACG--TCCACCGCATCCGCGCGACTGGCTCGTATATCGGAGGCACGAACGGCACAT 35635 Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGG 53546 || | ||| | || || |||||||| |||| ||||||||| || || ||||| |||||| Sbjct 35634 CCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTTGACCAGG 35575 Query 53547 GTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTA 53606 |||| |||||| || | || ||||||||||||||||| |||||||| || | Sbjct 35574 GTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCTGATGTCT 35515 Query 53607 TGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGT 53666 ||| || | || || || ||||| || | ||||| | ||| |||||||| | Sbjct 35514 TGGCCTTCATGGACCTCCGCAAAAATCACGGCAAGGAAGAAGTCCGCGCTCGTGACCTTT 35455 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 | || || ||||| || || || |||||| | || ||| || ||| || ||| Sbjct 35454 TCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGAGAACGGCGAATGGA 35395 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 ||| |||||||| || |||||||| || ||| | ||||||||| |||||||| Sbjct 35394 CCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGGCGAGGAGTT 35340 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||| |||||||| ||||||||||| || || || |||| ||||||||| | Sbjct 34657 CGCAACTCCCTTCTCGTGGCCCCAATGCCAACTGCTTCCACTTCTCAAATCATGGGCTTC 34598 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | |||||| ||| |||||| | || |||||| Sbjct 34597 AACGAGTGCTTCGAGCCATACACTAGCAACATTTACTCTCGCCGGGTGTTGGCTGGTGAG 34538 Query 55604 TT 55605 || Sbjct 34537 TT 34536 >seq2106 Length=142898 Score = 104 bits (114), Expect = 3e-17 Identities = 322/491 (66%), Gaps = 12/491 (2%) Strand=Plus/Minus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||||||| ||||| |||| || || | ||| || ||||||||||||||||| |||||| Sbjct 23726 ATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTCTTCAACCAGAAGATG 23667 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903 | ||| || ||| ||||||||| || |||||| || || |||| || || Sbjct 23666 GACGCGAACGACCCAGAGAAGAAGATACCCTCGACAGCAGCGAAAGCGATCAGTCGGCAG 23607 Query 74904 GCGAACGGTGCA---TCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACC 74960 || || | | | | | || ||||| | ||||| ||||| ||| | | Sbjct 23606 GCAAAGGTCGAATTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGC-CTTCTTACGGAT 23548 Query 74961 GCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAG 75019 || |||| ||||||| || | |||||| || || | ||| || ||| | Sbjct 23547 ACATGGGATGTTATCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTA 23488 Query 75020 CTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGC 75079 |||| || | || ||||| || ||||| || || ||| | | |||| | | Sbjct 23487 GGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCC 23428 Query 75080 GTAGAAAGACCGCGCCTCTGCAATCTGTACATC-CT-TTGAAAAATTCATGTCGATATTC 75137 |||||| | || || || | |||||||| || || ||||| ||| | | ||| Sbjct 23427 GTAGAAGCATCGTGCTTCAGGTATCTGTACTTCACTGCTGAAACGCTCA--ACCAGGTTC 23370 Query 75138 TCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGC 75197 || |||| || || || || |||||||| ||||| || || | ||| |||| ||| Sbjct 23369 TCGTTGACAATTCCATCAGATGCGGCGAAGAAAGCAAGGACGTGTGAGATGAAGTATCGC 23310 Query 75198 TCATCGTCAGTGAGT---TTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCG 75254 || || || | | | |||| ||| || | |||||| | || |||||||||||| Sbjct 23309 TCGTCATCGTTCAATCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCA 23250 Query 75255 ACCGTCCAGAA 75265 | |||||||| Sbjct 23249 GCAGTCCAGAA 23239 >seq2050 Length=198407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 294/447 (66%), Gaps = 10/447 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || ||||||||||| || || || || || |||| ||| || | | |||||||| Sbjct 115364 CCGGTTCCGATACCTTCGGCGCCGTTGATGAGAACCATGGGGAGAATCGGAACGTATTGT 115423 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 |||||||| | | || || ||| ||| | |||| || | |||| | || Sbjct 115424 TCAGGCTCGATAGTCTTGCCATCATCCAGATTGTATGTAAGCAGAGCTTCGTCAGACTGA 115483 Query 117272 TCGAATATGTTCTTG-GTCC--ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| || |||| || | | || | || | ||| |||||||||||| ||| || Sbjct 115484 TGGAAAAT---CTTGCGTGCGAAGGGCGACAGTCTCGTGTAAATGTAACGAGCGCTGGCC 115540 Query 117329 GCATCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 ||||| | ||||| |||| ||| | || || | ||||| || || | | |||| Sbjct 115541 GCATCGCTACCACCTTGCAA-ACGGGAGCCAAAGTTGCCACTTGGTTCAAGCACATTCAT 115599 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 |||||| | ||| ||||| || ||||||| || || || || ||| || || Sbjct 115600 GTTGTTAGAGCCGACAAAATTCTGAGCCATAGCCACGATGGTCTGCTGAAGGGAGGCATC 115659 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507 |||| |||| || ||| ||| ||| || || |||| ||||||||||||| Sbjct 115660 GCCATATGGATATGCAGTCAAACCCGAAACGAGACCAGCAAGCTCGACCACCTTCATGTC 115719 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 | ||| ||| || ||| | || || ||||| | ||||| ||||| || || Sbjct 115720 CTTCTTCATGTTGCGGCGGAAGCAAGTGTACATGACCTTTCTCTGACCCGGCTTGAGGCC 115779 Query 117568 ATCCGCCACGTGA-GGGATCGAACGCT 117593 ||| ||| ||| ||||||||||||| Sbjct 115780 ATCGATCAC-TGACGGGATCGAACGCT 115805 Score = 82.4 bits (90), Expect = 8e-11 Identities = 289/446 (65%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 ||||||| ||||| || || || ||||||| |||| ||| || | ||| || |||| Sbjct 115362 ATCCGGTTCCGATACCTTCGGCGCCGTTGATGAGAACCATGGGGAGAATCGGAACGTATT 115421 Query 151934 ACTCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992 || ||||| | | ||| || ||||||| |||| | | | | | ||||| | Sbjct 115422 GTTCAGGCTCGATAGTCTTG-CCATCATCCAGATTGTATGTAAGCAGAGCTTCGTCAGAC 115480 Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 ||| ||| ||| || | | || || | |||| | ||||| || | ||||||| Sbjct 115481 TGATGGAAAATCTTGCGTGCGAAGGGCGACAGTCTCGTGTAAATGTAACGAGCGCTGGCC 115540 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 ||||| | |||||| || || | ||||| | ||| || || || | || | | Sbjct 115541 GCATCGCTACCACCTTGCAAACGGGAGCCAAAGTTGCCACTTGGTTCAAGCACATTCATG 115600 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 ||||| | ||| || ||||||||||||| | ||| || || ||| || || || Sbjct 115601 TTGTTAGAGCCGACAAAATTCTGAGCCATAGCCACGATGGTCTGCTGAAGGGAGGCATCG 115660 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 || | |||| || ||| ||| | | || || | || |||||||||||||| Sbjct 115661 CCATATGGATATGCAGTCAAACCCGAAACGAGACCAGCAAGCTCGACCACCTTCATGTCC 115720 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 || ||| ||| || || | ||| || ||||| | ||| || || | || Sbjct 115721 TTCTTCATGTTGCGGCGGAAGCAAGTGTACATGACCTTTCTCTGACCCGGCTTGAGGCCA 115780 Query 152293 TCCACCACGTGA-GGAATCGAACGCT 152317 || | ||| ||| || |||||||||| Sbjct 115781 TCGATCAC-TGACGGGATCGAACGCT 115805 Score = 82.4 bits (90), Expect = 8e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 153858 CTTGGCACCGTAACCATTGCGACCGCCCGTCACGCGTTG-TTCCTCGTCGTTGTAGTTGG 153916 ||| ||||||||||| ||||||||||| || | | | ||| | ||||| |||||| | Sbjct 117424 CTTTGCACCGTAACCGTTGCGACCGCCAGTGGT-CTTCGCTTCATTGTCGTCGTAGTTTG 117482 Query 153917 AGCTGGTCAAAAGGTGCCCAAAGATGAGTTCAGGGATCCAGATG 153960 || ||||| ||| || |||||||| | ||| |||||||||||| Sbjct 117483 AGGAGGTCAGAAGATGGCCAAAGATCATTTCCGGGATCCAGATG 117526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547198037634800