Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq635 232 7e-56
seq2106 104 3e-17
seq2050 95.1 1e-14
>seq635
Length=74236
Score = 232 bits (256), Expect = 7e-56
Identities = 411/595 (69%), Gaps = 12/595 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCG----TGAGACG 53248
||||||| || || | || ||||||||||| || || | | ||| ||||||
Sbjct 35928 TCATGCGTGTGGCTGTTGGCATCCACGGTGAGGA-TATT---GAGGCCGCTATTGAGACC 35873
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| ||| ||| | | |||||||| || ||||| |||| || || |||| |||||||
Sbjct 35872 TACAACTACATGTCCAACAAGTACTTCACACACGCTTCGCCCACGCTTTTCAGCGCTGGT 35813
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| | | ||||| | | ||||| |||| | |||||||||||| |||||
Sbjct 35812 ACGCCTAATGCTCAGCTCGCCTCATGCTTTTTGGTCGACATGAAGGATGACAGCATCGAG 35753
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| |||||||| || |||||| |||||| ||||| ||| | || || || |||
Sbjct 35752 GGTATCTACGACACTCTCAAGACTTGTGCCATGATCTCAAAGAACGCAGGAGGCATTGGT 35693
Query 53429 ATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCG 53486
|| || || | || |||| |||| ||| | ||| || |||||||||
Sbjct 35692 CTCAACG--TCCACCGCATCCGCGCGACTGGCTCGTATATCGGAGGCACGAACGGCACAT 35635
Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGG 53546
|| | ||| | || || |||||||| |||| ||||||||| || || ||||| ||||||
Sbjct 35634 CCAACGGACTGGTTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTTGACCAGG 35575
Query 53547 GTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTA 53606
|||| |||||| || | || ||||||||||||||||| |||||||| || |
Sbjct 35574 GTGGCAATAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCTGATGTCT 35515
Query 53607 TGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGT 53666
||| || | || || || ||||| || | ||||| | ||| |||||||| |
Sbjct 35514 TGGCCTTCATGGACCTCCGCAAAAATCACGGCAAGGAAGAAGTCCGCGCTCGTGACCTTT 35455
Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726
| || || ||||| || || || |||||| | || ||| || ||| || |||
Sbjct 35454 TCTTCGCACTTTGGATCCCAGATCTGTTCATGAAGCGTGTTGAGGAGAACGGCGAATGGA 35395
Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
||| |||||||| || |||||||| || ||| | ||||||||| ||||||||
Sbjct 35394 CCCTCATGTGCCCCAATGAGTGCCCTGGTCTCGCCGATGTCTACGGCGAGGAGTT 35340
Score = 104 bits (114), Expect = 3e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||||||||| |||||||| ||||||||||| || || || |||| ||||||||| |
Sbjct 34657 CGCAACTCCCTTCTCGTGGCCCCAATGCCAACTGCTTCCACTTCTCAAATCATGGGCTTC 34598
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| | |||||| ||| |||||| | || ||||||
Sbjct 34597 AACGAGTGCTTCGAGCCATACACTAGCAACATTTACTCTCGCCGGGTGTTGGCTGGTGAG 34538
Query 55604 TT 55605
||
Sbjct 34537 TT 34536
>seq2106
Length=142898
Score = 104 bits (114), Expect = 3e-17
Identities = 322/491 (66%), Gaps = 12/491 (2%)
Strand=Plus/Minus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843
|||||||| ||||| |||| || || | ||| || ||||||||||||||||| ||||||
Sbjct 23726 ATCAATTCGTTCGAGAACGTGAGACCGGCCATGAGACCACGCTTCTTCAACCAGAAGATG 23667
Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903
| ||| || ||| ||||||||| || |||||| || || |||| || ||
Sbjct 23666 GACGCGAACGACCCAGAGAAGAAGATACCCTCGACAGCAGCGAAAGCGATCAGTCGGCAG 23607
Query 74904 GCGAACGGTGCA---TCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACC 74960
|| || | | | | | || ||||| | ||||| ||||| ||| | |
Sbjct 23606 GCAAAGGTCGAATTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGC-CTTCTTACGGAT 23548
Query 74961 GCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAG 75019
|| |||| ||||||| || | |||||| || || | ||| || ||| |
Sbjct 23547 ACATGGGATGTTATCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTA 23488
Query 75020 CTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGC 75079
|||| || | || ||||| || ||||| || || ||| | | |||| | |
Sbjct 23487 GGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCC 23428
Query 75080 GTAGAAAGACCGCGCCTCTGCAATCTGTACATC-CT-TTGAAAAATTCATGTCGATATTC 75137
|||||| | || || || | |||||||| || || ||||| ||| | | |||
Sbjct 23427 GTAGAAGCATCGTGCTTCAGGTATCTGTACTTCACTGCTGAAACGCTCA--ACCAGGTTC 23370
Query 75138 TCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGC 75197
|| |||| || || || || |||||||| ||||| || || | ||| |||| |||
Sbjct 23369 TCGTTGACAATTCCATCAGATGCGGCGAAGAAAGCAAGGACGTGTGAGATGAAGTATCGC 23310
Query 75198 TCATCGTCAGTGAGT---TTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCG 75254
|| || || | | | |||| ||| || | |||||| | || ||||||||||||
Sbjct 23309 TCGTCATCGTTCAATCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCA 23250
Query 75255 ACCGTCCAGAA 75265
| ||||||||
Sbjct 23249 GCAGTCCAGAA 23239
>seq2050
Length=198407
Score = 95.1 bits (104), Expect = 1e-14
Identities = 294/447 (66%), Gaps = 10/447 (2%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| ||||||||||| || || || || || |||| ||| || | | ||||||||
Sbjct 115364 CCGGTTCCGATACCTTCGGCGCCGTTGATGAGAACCATGGGGAGAATCGGAACGTATTGT 115423
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|||||||| | | || || ||| ||| | |||| || | |||| | ||
Sbjct 115424 TCAGGCTCGATAGTCTTGCCATCATCCAGATTGTATGTAAGCAGAGCTTCGTCAGACTGA 115483
Query 117272 TCGAATATGTTCTTG-GTCC--ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328
| ||| || |||| || | | || | || | ||| |||||||||||| ||| ||
Sbjct 115484 TGGAAAAT---CTTGCGTGCGAAGGGCGACAGTCTCGTGTAAATGTAACGAGCGCTGGCC 115540
Query 117329 GCATCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387
||||| | ||||| |||| ||| | || || | ||||| || || | | ||||
Sbjct 115541 GCATCGCTACCACCTTGCAA-ACGGGAGCCAAAGTTGCCACTTGGTTCAAGCACATTCAT 115599
Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447
|||||| | ||| ||||| || ||||||| || || || || ||| || ||
Sbjct 115600 GTTGTTAGAGCCGACAAAATTCTGAGCCATAGCCACGATGGTCTGCTGAAGGGAGGCATC 115659
Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507
|||| |||| || ||| ||| ||| || || |||| |||||||||||||
Sbjct 115660 GCCATATGGATATGCAGTCAAACCCGAAACGAGACCAGCAAGCTCGACCACCTTCATGTC 115719
Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567
| ||| ||| || ||| | || || ||||| | ||||| ||||| || ||
Sbjct 115720 CTTCTTCATGTTGCGGCGGAAGCAAGTGTACATGACCTTTCTCTGACCCGGCTTGAGGCC 115779
Query 117568 ATCCGCCACGTGA-GGGATCGAACGCT 117593
||| ||| ||| |||||||||||||
Sbjct 115780 ATCGATCAC-TGACGGGATCGAACGCT 115805
Score = 82.4 bits (90), Expect = 8e-11
Identities = 289/446 (65%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
||||||| ||||| || || || ||||||| |||| ||| || | ||| || ||||
Sbjct 115362 ATCCGGTTCCGATACCTTCGGCGCCGTTGATGAGAACCATGGGGAGAATCGGAACGTATT 115421
Query 151934 ACTCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992
|| ||||| | | ||| || ||||||| |||| | | | | | ||||| |
Sbjct 115422 GTTCAGGCTCGATAGTCTTG-CCATCATCCAGATTGTATGTAAGCAGAGCTTCGTCAGAC 115480
Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052
||| ||| ||| || | | || || | |||| | ||||| || | |||||||
Sbjct 115481 TGATGGAAAATCTTGCGTGCGAAGGGCGACAGTCTCGTGTAAATGTAACGAGCGCTGGCC 115540
Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112
||||| | |||||| || || | ||||| | ||| || || || | || | |
Sbjct 115541 GCATCGCTACCACCTTGCAAACGGGAGCCAAAGTTGCCACTTGGTTCAAGCACATTCATG 115600
Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172
||||| | ||| || ||||||||||||| | ||| || || ||| || || ||
Sbjct 115601 TTGTTAGAGCCGACAAAATTCTGAGCCATAGCCACGATGGTCTGCTGAAGGGAGGCATCG 115660
Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232
|| | |||| || ||| ||| | | || || | || ||||||||||||||
Sbjct 115661 CCATATGGATATGCAGTCAAACCCGAAACGAGACCAGCAAGCTCGACCACCTTCATGTCC 115720
Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292
|| ||| ||| || || | ||| || ||||| | ||| || || | ||
Sbjct 115721 TTCTTCATGTTGCGGCGGAAGCAAGTGTACATGACCTTTCTCTGACCCGGCTTGAGGCCA 115780
Query 152293 TCCACCACGTGA-GGAATCGAACGCT 152317
|| | ||| ||| || ||||||||||
Sbjct 115781 TCGATCAC-TGACGGGATCGAACGCT 115805
Score = 82.4 bits (90), Expect = 8e-11
Identities = 82/104 (79%), Gaps = 2/104 (2%)
Strand=Plus/Plus
Query 153858 CTTGGCACCGTAACCATTGCGACCGCCCGTCACGCGTTG-TTCCTCGTCGTTGTAGTTGG 153916
||| ||||||||||| ||||||||||| || | | | ||| | ||||| |||||| |
Sbjct 117424 CTTTGCACCGTAACCGTTGCGACCGCCAGTGGT-CTTCGCTTCATTGTCGTCGTAGTTTG 117482
Query 153917 AGCTGGTCAAAAGGTGCCCAAAGATGAGTTCAGGGATCCAGATG 153960
|| ||||| ||| || |||||||| | ||| ||||||||||||
Sbjct 117483 AGGAGGTCAGAAGATGGCCAAAGATCATTTCCGGGATCCAGATG 117526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547198037634800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |