Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1950 104 2e-17 >seq1950 Length=170036 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || || ||| | || || || || || || | || Sbjct 63252 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCA 63311 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || |||||||| || Sbjct 63312 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCCGACCAG 63371 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| ||| | || || | ||| | |||||||||||| Sbjct 63372 CAGCGCTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGTCCGATTACAAC 63431 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || | || | ||| | || ||||| || Sbjct 63432 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTTCGTCTCCGTGGTGGTAT 63481 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTG-----GAAC 27042 |||||||| || || || || || ||||||||| |||| || ||||||||| ||| Sbjct 63480 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTGAAGTGGAAT 63539 Query 27043 CGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCG 27102 | || ||| | || || | ||||| || ||||||||||| || ||||| ||||| | Sbjct 63540 CATCAGACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAG 63599 Query 27103 ATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATT 27162 | || ||||| | || | ||| || || || | || ||| | ||| | ||| | Sbjct 63600 ACCAGCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGGACACTGAGCGACT 63659 Query 27163 ACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||| || |||||| || | || ||||| | ||| |||| ||||| Sbjct 63660 ACAACATCCAGAAGGAGAGCACTCTGCACTTGGTGCTTCGTCTGCGTGGTGG 63711 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | || || || || || || | |||||| | || || | || || Sbjct 63046 TGACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGA 63105 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || || ||||| || || || || || ||||| |||||| | || | |||||||| Sbjct 63106 GCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCA 63165 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||| | || ||| | || |||| |||||||| ||||| |||||||| || | | Sbjct 63166 AGCAACTCGAGGACGGCCGCACTCTTTCTGATTACAATATTCAGAAGGAGTCCACTCTCC 63225 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | | || | || |||| ||||| || Sbjct 63226 ACCTTGTCCTCCGCCTGCGTGGTGGTAT 63253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434904123803520