Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1950 116 9e-21 seq1821 98.7 2e-15 >seq1950 Length=170036 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || |||||||||||||||| | || | ||||| Sbjct 63463 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCC 63404 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | ||||||||| | | || || ||||| || Sbjct 63403 TCGAGTTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCC 63344 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || |||||| | || | | |||||||| ||| || || || || || || Sbjct 63343 TGAATCTTGGACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTC 63284 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||| ||||| Sbjct 63283 TTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 63252 Score = 105 bits (116), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||| || ||||||||||| ||| | || | || || || | Sbjct 63691 CAAG-TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCGTCCTCGA 63633 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | ||||||||| | | ||| || ||||| ||||||| Sbjct 63632 GCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAA 63573 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGA-----ACTCTCTACTTCAAGAGTAATAGT 152071 | || |||||| | || | | ||||||| | || |||||||| || ||||| Sbjct 63572 TCTTCGACTTGACATTGTCGATGGTGTCTGATGATTCCACTTCACTTCAAGTGTGATAGT 63513 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 63512 CTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480 >seq1821 Length=46945 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGCTTTTCCCGGCGAAGA 151974 |||||||||||||| || | ||||| | ||||| || | ||||| || ||||||| Sbjct 19298 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAACTGCTTT--CCAGCGAAGA 19241 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | |||||| |||| | |||||| ||||| || || || || |||||| | | Sbjct 19240 TCAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 19181 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| || ||| || ||||| || || || |||||||| || ||||| |||| Sbjct 19180 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19121 Query 152095 AG 152096 || Sbjct 19120 AG 19119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153781978978046