Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 116 9e-21
seq1821 98.7 2e-15
>seq1950
Length=170036
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || ||||| ||||| || |||||||||||||||| | || | |||||
Sbjct 63463 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCC 63404
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| | | ||||||||| | | || || ||||| ||
Sbjct 63403 TCGAGTTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCC 63344
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || |||||| | || | | |||||||| ||| || || || || || ||
Sbjct 63343 TGAATCTTGGACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTC 63284
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| || |||| |||||
Sbjct 63283 TTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 63252
Score = 105 bits (116), Expect = 2e-17
Identities = 152/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||| || ||||||||||| ||| | || | || || || |
Sbjct 63691 CAAG-TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCGTCCTCGA 63633
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| || | ||||||||| | | ||| || ||||| |||||||
Sbjct 63632 GCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAA 63573
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGA-----ACTCTCTACTTCAAGAGTAATAGT 152071
| || |||||| | || | | ||||||| | || |||||||| || |||||
Sbjct 63572 TCTTCGACTTGACATTGTCGATGGTGTCTGATGATTCCACTTCACTTCAAGTGTGATAGT 63513
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| ||||||
Sbjct 63512 CTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480
>seq1821
Length=46945
Score = 98.7 bits (108), Expect = 2e-15
Identities = 132/182 (73%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGCTTTTCCCGGCGAAGA 151974
|||||||||||||| || | ||||| | ||||| || | ||||| || |||||||
Sbjct 19298 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAACTGCTTT--CCAGCGAAGA 19241
Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034
| || | |||||| |||| | |||||| ||||| || || || || |||||| | |
Sbjct 19240 TCAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 19181
Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| | |||| || ||| || ||||| || || || |||||||| || ||||| ||||
Sbjct 19180 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19121
Query 152095 AG 152096
||
Sbjct 19120 AG 19119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153781978978046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |