Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1950 127 1e-24 seq1821 109 4e-19 >seq1950 Length=170036 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| |||||||||||||||| || || | || || Sbjct 63460 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCG 63401 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || |||||||| |||||||| || | || | ||| ||||| ||| Sbjct 63400 AGTTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGA 63341 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | || || ||||| | || || |||| Sbjct 63340 ATCTTGGACTTGACATTGT--CAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCT 63283 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||||||||| || ||||||||||| Sbjct 63282 TTCCAGTGAGGGTCTTGACAAAGATTTGCAT 63252 Score = 118 bits (130), Expect = 8e-22 Identities = 169/236 (72%), Gaps = 9/236 (4%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || | ||| | | ||||| ||| || ||||||||||| ||||||||||| ||| Sbjct 63713 TTCCACCACGCAGACGAAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 63654 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||| || |||| || |||||||| || || ||||| | |||||||| |||| | Sbjct 63653 TCAGTGTCCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTG 63594 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | || ||||| || |||||| ||| || ||| | |||||||| | ||||| Sbjct 63593 GGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGT--CGATGGTGTCTGATGATTC 63536 Query 44287 -----CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 63535 CACTTCACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| || || |||||||| | || ||| |||| || Sbjct 63232 ACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 63173 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| || || | |||||||||||| | ||| | || ||||| ||| Sbjct 63172 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGG 63113 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| ||| || ||||| | || || ||||| Sbjct 63112 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 63053 Query 44309 CCCGT 44313 || || Sbjct 63052 CCGGT 63048 >seq1821 Length=46945 Score = 109 bits (120), Expect = 4e-19 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 44141 GTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCG 44200 |||| | |||||||||||||||| || | | ||| | || |||| |||||| || Sbjct 19307 GTGCGCACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAACTGCTTTCCA 19248 Query 44201 GCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT- 44259 || ||||||| |||||||||||| | || | || ||||| ||| ||||| ||| Sbjct 19247 GCGAAGATCAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTG 19188 Query 44260 -CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGG 44318 || ||| | || ||||||| ||| || ||||| | || || ||||| ||||| |||| Sbjct 19187 ACATTGT--CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGG 19130 Query 44319 TCTTCACGAAG 44329 |||| |||||| Sbjct 19129 TCTTGACGAAG 19119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359978878732242