Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 127 1e-24
seq1821 109 4e-19
>seq1950
Length=170036
Score = 127 bits (140), Expect = 1e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| |||||||||||||||| || || | || ||
Sbjct 63460 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCATCCTCG 63401
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || |||||||| |||||||| || | || | ||| ||||| |||
Sbjct 63400 AGTTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGTGGAATACCCTCCTTGTCCTGA 63341
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| | || || ||||| | || || ||||
Sbjct 63340 ATCTTGGACTTGACATTGT--CAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCT 63283
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| ||||||||||| || |||||||||||
Sbjct 63282 TTCCAGTGAGGGTCTTGACAAAGATTTGCAT 63252
Score = 118 bits (130), Expect = 8e-22
Identities = 169/236 (72%), Gaps = 9/236 (4%)
Strand=Plus/Minus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| || | ||| | | ||||| ||| || ||||||||||| ||||||||||| |||
Sbjct 63713 TTCCACCACGCAGACGAAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 63654
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||| || |||| || |||||||| || || ||||| | |||||||| |||| |
Sbjct 63653 TCAGTGTCCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCTGGTG 63594
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | || ||||| || |||||| ||| || ||| | |||||||| | |||||
Sbjct 63593 GGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGT--CGATGGTGTCTGATGATTC 63536
Query 44287 -----CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | || || ||||| || ||||| ||||| |||||||| |||||
Sbjct 63535 CACTTCACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 63480
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| || || |||||||| | || ||| |||| ||
Sbjct 63232 ACAAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 63173
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| || || | |||||||||||| | ||| | || ||||| |||
Sbjct 63172 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGG 63113
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||||| ||| || ||||| | || || |||||
Sbjct 63112 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 63053
Query 44309 CCCGT 44313
|| ||
Sbjct 63052 CCGGT 63048
>seq1821
Length=46945
Score = 109 bits (120), Expect = 4e-19
Identities = 140/191 (73%), Gaps = 4/191 (2%)
Strand=Plus/Minus
Query 44141 GTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCG 44200
|||| | |||||||||||||||| || | | ||| | || |||| |||||| ||
Sbjct 19307 GTGCGCACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAACTGCTTTCCA 19248
Query 44201 GCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT- 44259
|| ||||||| |||||||||||| | || | || ||||| ||| ||||| |||
Sbjct 19247 GCGAAGATCAGACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTG 19188
Query 44260 -CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGG 44318
|| ||| | || ||||||| ||| || ||||| | || || ||||| ||||| ||||
Sbjct 19187 ACATTGT--CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGG 19130
Query 44319 TCTTCACGAAG 44329
|||| ||||||
Sbjct 19129 TCTTGACGAAG 19119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359978878732242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |