Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1032 111 3e-19 >seq1032 Length=45607 Score = 111 bits (122), Expect = 3e-19 Identities = 301/448 (67%), Gaps = 17/448 (4%) Strand=Plus/Minus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGG 230261 ||||||||||| | || ||||| || ||| ||||||| |||||| ||| || Sbjct 28927 GTTGAAGGTATCTTCTTCTCCGGATCCTT-TGCATCCATCTTCTGGCTGAAGAAGCGTGG 28869 Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321 | | |||||||| ||| | || |||||| ||||| |||||||| || | || || Sbjct 28868 TCTCATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGGCATGCA-CA 28810 Query 230322 AC-AGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTC 230379 | | |||| || || | ||| || | || ||||||||| || || | ||| Sbjct 28809 CCGACTTCG-CGTGCCTGCTGTTCTCTCACCTGAAGAACAAGCCCTCAA---AGGCTGTC 28754 Query 230380 AAACAAATCATTACAG---AAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATT 230436 ||| | ||| | | | || |||| | ||| |||||||| | ||||| | Sbjct 28753 GTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCCTGACAGACGCCCTC 28694 Query 230437 CCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGC 230495 || || ||| || | |||||||||||| | || ||| | |||||||| ||||| || || Sbjct 28693 CCCTG-CGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAATTTGTGGC 28635 Query 230496 CGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGC 230555 |||||| | | | || || || || |||| | |||||| | | ||||| || | Sbjct 28634 CGACCGTCTGCTCCTGGCGCTCGGCAACCAGAAGTTCTACAACGCCACCAACCCGTTCGA 28575 Query 230556 ATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT---CTTCGAAAAGCGTGTCAG 230612 || |||||| || ||||| || ||||||||||| |||||| ||||| || | Sbjct 28574 CTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTTCTTCTTCGAGAAGCGCGTTGG 28515 Query 230613 TGACTATCAGAGGCCTGGTGTGATGAAG 230640 ||||| || | | | ||||| ||| || Sbjct 28514 AGACTACCAAAAGGCCGGTGTCATGGAG 28487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057796527319010