Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 111 3e-19
>seq1032
Length=45607
Score = 111 bits (122), Expect = 3e-19
Identities = 301/448 (67%), Gaps = 17/448 (4%)
Strand=Plus/Minus
Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGG 230261
||||||||||| | || ||||| || ||| ||||||| |||||| ||| ||
Sbjct 28927 GTTGAAGGTATCTTCTTCTCCGGATCCTT-TGCATCCATCTTCTGGCTGAAGAAGCGTGG 28869
Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321
| | |||||||| ||| | || |||||| ||||| |||||||| || | || ||
Sbjct 28868 TCTCATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGGCATGCA-CA 28810
Query 230322 AC-AGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTC 230379
| | |||| || || | ||| || | || ||||||||| || || | |||
Sbjct 28809 CCGACTTCG-CGTGCCTGCTGTTCTCTCACCTGAAGAACAAGCCCTCAA---AGGCTGTC 28754
Query 230380 AAACAAATCATTACAG---AAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATT 230436
||| | ||| | | | || |||| | ||| |||||||| | ||||| |
Sbjct 28753 GTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCCTGACAGACGCCCTC 28694
Query 230437 CCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGC 230495
|| || ||| || | |||||||||||| | || ||| | |||||||| ||||| || ||
Sbjct 28693 CCCTG-CGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAATTTGTGGC 28635
Query 230496 CGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGC 230555
|||||| | | | || || || || |||| | |||||| | | ||||| || |
Sbjct 28634 CGACCGTCTGCTCCTGGCGCTCGGCAACCAGAAGTTCTACAACGCCACCAACCCGTTCGA 28575
Query 230556 ATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT---CTTCGAAAAGCGTGTCAG 230612
|| |||||| || ||||| || ||||||||||| |||||| ||||| || |
Sbjct 28574 CTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTTCTTCTTCGAGAAGCGCGTTGG 28515
Query 230613 TGACTATCAGAGGCCTGGTGTGATGAAG 230640
||||| || | | | ||||| ||| ||
Sbjct 28514 AGACTACCAAAAGGCCGGTGTCATGGAG 28487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057796527319010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |