Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 131 2e-25
>seq1032
Length=45607
Score = 131 bits (144), Expect = 2e-25
Identities = 553/857 (65%), Gaps = 20/857 (2%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAG---TTAGTTTTGCCCTCTAGAGATATAT 16730
||||||| || | |||||| || ||||| ||| || || ||||| | || || ||||
Sbjct 28504 TTTGGTAGTCTCCAACGCGCTTCTCGAAGAAGAAGTTGGTCTTGCCACCCAGCGAGATAT 28563
Query 16731 TCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGC 16788
|||||||||| || || || || || || || | | || | | | || || |
Sbjct 28564 TCTCCATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGG--TTGCCGAGCGCCAG 28621
Query 16789 GATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTA 16847
|| | | || || |||||||| || || |||||||| | || || |||||| || |
Sbjct 28622 GAGCAGACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGC-GTTCATGCCGA 28680
Query 16848 TAAGA-CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTA 16906
|| || | ||| | || || |||| || ||||| || |||| || ||
Sbjct 28681 GGAGTGCGCAGGGGAGG-GCGTCTGTCAGGAACTCCTGCTCGATCGCAACGGCCTCGACG 28739
Query 16907 ATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACAT 16966
|| || || || ||| || || | | || || || |||| ||| ||
Sbjct 28740 ATGATGCTCTGTACGACAGCCTTTGAGGGCTTGTTCTTCAGGTGAGAGAACAGCAGGCAC 28799
Query 16967 GCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCG 17026
||||| ||| || | || ||||| | ||| || ||||| || || || | ||
Sbjct 28800 GCGAAGTCGGTGTGCATGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGACCA 28859
Query 17027 GGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATA 17086
||||| || || ||||| | ||| || || | || || || || || ||||| |||
Sbjct 28860 GGCATGAGACCACGCTTCTTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGATA 28919
Query 17087 CCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATC 17146
|| || || | || || || || | ||| |||| | |||| | |||| | |||
Sbjct 28920 CCTTCAACTGCAGCGAAGGCAATCAGTCGCATGGCGAAGGTCGAGCTCTTGTCGCTGATC 28979
Query 17147 CATTTCTGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
||| | |||| || || ||| ||| |||||| || | || ||||| || ||
Sbjct 28980 CATCGGAGTGCCCAGTCCGCCTTTCTGCGG-ATGCAAGGGATATTGTCGATGGCGTTGAA 29038
Query 17206 TAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264
| | | || | | | || ||| | || || || |||||||| ||| ||| | |
Sbjct 29039 CAGGTA-TGTTCGTTGTTTGGGCTCGCTAATGTATGTGTCGATGAGGAGGGAGTATGTCT 29097
Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324
| ||||| ||||||||||| ||||| ||||| || |||||||| ||||| | || |
Sbjct 29098 CCGAGTGGATGTTCTCCATCATGATCTGGAATCCATAGAAGCATCGTGCTTCGGGTACTG 29157
Query 17325 GAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384
||||| || ||| |||||| | || || ||||| |||||||| || |||||||
Sbjct 29158 TCACTTCGGCGCTGAAGCGTTCCACCAGGTTCTCGTTGACGATGCCATCTGATGCGGCGA 29217
Query 17385 AAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAAC--GCGCCAG 17440
| || || | | ||| ||||| | ||||| ||||| | | | | ||||
Sbjct 29218 AGAATGCAAGAACATGTGAGATGAAGAAACGCTCGTCGTCGGTG-AGGCGCTTGTTCCAG 29276
Query 17441 TCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTT 17500
|| | | ||| || |||| ||| | || |||| ||||| || || | |||||
Sbjct 29277 TCATGCAGATCCTTTGATAGATCAATCTCCTCGGCAGTCCAGAATGATGCTTCGGCCTTC 29336
Query 17501 TTATACATATTCCAAAT 17517
|| ||||| ||||| ||
Sbjct 29337 TTGTACATGTTCCATAT 29353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517532486688360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |