Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1917 113 5e-20 >seq1917 Length=9250 Score = 113 bits (124), Expect = 5e-20 Identities = 162/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 ||| ||||| || | |||||||||||||| |||| ||||||||||| ||||| ||||| Sbjct 8941 CTACTGTCCACCACGCAAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTA 9000 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || | || ||| || | || || | |||||| || ||||| || || ||||||||||| Sbjct 9001 GTCTGACAAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTC 9060 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCG 43128 | || | | |||||||| | ||| | || | || | | | | |||||| | Sbjct 9061 CGGTGGGATTCCCTCCTTGT-CTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGG 9119 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 43174 ||||||| || | ||| || || || || || || ||||| || || Sbjct 9120 ATTCCACTTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571803111571560