Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1917 116 2e-21 >seq1917 Length=9250 Score = 116 bits (128), Expect = 2e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || |||| | || ||||| ||| | ||| || || ||||| ||||||||||| || Sbjct 8947 TCCACCACGCAAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGA 9006 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || ||||||||||||||||||||||| || ||||||||||| || Sbjct 9007 CAAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGG 9066 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | | |||| || | ||||| || Sbjct 9067 GATTCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCAC 9126 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | ||| || || || || ||||| || || || || Sbjct 9127 TTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323064018809120