Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq721 100 6e-16 >seq721 Length=104476 Score = 100 bits (110), Expect = 6e-16 Identities = 210/312 (67%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||||| || |||||| | ||| | | ||||| ||||||||||| ||| Sbjct 59668 GCCATTGTCTACGACAGAGATTTCAACTACCAATACTTTGGCTTCAAAACGCTAGAGCGC 59727 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || || ||| || ||||||||| ||| || || ||||||||| | ||||| Sbjct 59728 TCATACCTGCTCCGGATCGATGGCAAGGTCGCCGAGAGACCGCAGCACATGATCATGCGT 59787 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAAT- 248969 || || ||||| |||||| || || || ||| || ||||||| |||| | || Sbjct 59788 GTAGCAGTCGGAATTCACGGAGACGATATCGAGGCCGCCATCGAGACATACAACTACATG 59847 Query 248970 --GAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAAC 249027 || | | || | ||||| || |||| || || |||| ||| ||||| ||| Sbjct 59848 TCGAATAAGTACT---TCACACACGCATCACCAACACTGTTCAGCGCTGGTACGCCGAAC 59904 Query 249028 AATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTAT 249087 ||| || || ||||| || | | |||| |||||||| | || || ||||| Sbjct 59905 GGCCAGTTGGCTTCTTGCTTCCTCATCGACATGAAAGACGACAGCATTGAGGGAATTTAC 59964 Query 249088 GACACGCTTAAA 249099 || || || ||| Sbjct 59965 GATACACTGAAA 59976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073738513279936