Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq721 374 8e-99 seq1032 230 2e-55 seq1917 82.4 7e-11 >seq721 Length=104476 Score = 374 bits (414), Expect = 8e-99 Identities = 662/956 (69%), Gaps = 12/956 (1%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || ||||||||||||||||| || || || | |||||||| | || || || || Sbjct 60611 GATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCAC 60552 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 | ||| | ||| ||||| || | ||| |||||||||| || || ||| | |||| Sbjct 60551 AAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCC 60492 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||| ||| | || ||| ||||| ||| | || | || || ||| || Sbjct 60491 TTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTTCCAGAATGGCATACCAGATC 60432 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | ||| ||| | ||| || | ||||||| |||||| ||| | | | Sbjct 60431 TTCTGAGCACGCACA-GTCTCGCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTC 60373 Query 23266 GTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGAC 23324 || |||||| ||||||| ||| || || || ||||| | | | || ||||| || Sbjct 60372 CTCGAATTCGTCACCGTACACA-TCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGG 60314 Query 23325 TCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384 |||| | || | ||| || || |||| || ||||| || ||||| || ||| ||| Sbjct 60313 TCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGA 60254 Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444 |||| ||||| ||||| || || || || ||| |||||| | ||||| || | Sbjct 60253 ACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTTCTTGCGTAGATCCATGAAAGAAA 60194 Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504 || || || ||||| |||||||| |||| |||||| ||||| || | ||| ||||| | Sbjct 60193 TGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCAC 60134 Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGG 23564 | |||||||| ||||| || ||||||||||| || | ||||| || | || ||||||| Sbjct 60133 CTTGATCGACATAACGAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGG 60074 Query 23565 ACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAAC 23624 | | |||| ||| || | || || | || |||| |||||| || || || Sbjct 60073 ATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGAC 60014 Query 23625 CTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCT 23684 | || || || | || || ||||| ||||| |||||| || ||||| || |||| Sbjct 60013 CGATACCACCAGCATTCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCT 59954 Query 23685 CGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAG 23744 | |||||||| ||||| | ||| | ||| || |||| || || | || |||||| Sbjct 59953 CAATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTAC 59894 Query 23745 CGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTAC 23803 | || ||||||||| || ||||| || ||||| ||||||||| ||| ||||| Sbjct 59893 CAGCGCTGAACAGTGTTGGTGATGCGTGTGTGAAGTACTTATTCGACATGTAG-TTGTAT 59835 Query 23804 GTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATG 23863 || ||||||||||| || || || |||||||| || |||| || || ||||| |||||| Sbjct 59834 GTCTCGATGGCGGCCTCGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATG 59775 Query 23864 TATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920 | || ||||||| ||||| | ||| | || || ||| ||||| || | | | Sbjct 59774 TGCTGCGGTCTCTCGGCGACCTT---GCCATCGATCCGGAGCAGGTATGAGCGCTCTAGC 59718 Query 23921 GTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 ||||| || ||||| || | ||||| || || | |||| || ||||| || || Sbjct 59717 GTTTTGAAGCCAAAGTATTGGTAGTTGAAATCTCTGTCGTAGACAATGGCAGAGTT 59662 >seq1032 Length=45607 Score = 230 bits (254), Expect = 2e-55 Identities = 563/845 (67%), Gaps = 20/845 (2%) Strand=Plus/Minus Query 57555 ATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTC 57614 ||||||| | | | || |||||||||||||| ||||| |||||||| || ||||| | | Sbjct 29367 ATTGAAT-TGAACAGATATGGAACATGTACAAGAAGGCCGAAGCATCATTCTGGACTGCC 29309 Query 57615 GAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC---CCTCAAAGAATCTGAG 57671 || || | || || || ||||||||| || ||| | ||||| || ||| Sbjct 29308 GAGGAGATTGATCTATCAAAGGATCTGCATGACTGGAACAAGCGCCTCACCGACGACGAG 29249 Query 57672 AGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAG 57731 | || || ||| || | || || ||||||||||| ||||| || || |||||| Sbjct 29248 CGTTTCTTCATCTCACATGTTCTTGCATTCTTCGCCGCATCAGATGGCATCGTCAACGAG 29189 Query 57732 AATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGA 57791 || |||| ||| | || |||||| ||| | || || ||||||| || ||| Sbjct 29188 AACCTGGTGGAACGCTTCAGCGCCGAAGTGACAGTACCCGAAGCACGATGCTTCTATGGA 29129 Query 57792 TTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC 57851 || || | || || ||| | || || || | || || || |||||||| || ||| Sbjct 29128 TTCCAGATCATGATGGAGAACATCCACTCGGAGACATACTCCCTCCTCATCGACACATAC 29069 Query 57852 GTGAAGGA---CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG 57908 | | || ||| || | ||| || ||||||||||| ||||| | || || Sbjct 29068 ATTAGCGAGCCCAA--ACAACGAACATAC-CTGTTCAACGCCATCGACAATATCCCTTGC 29012 Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACG---TTC 57965 ||| || ||||| || ||| || || |||||| | ||| || | | || ||| Sbjct 29011 ATCCGCAGAAAGGCGGACTGGGCACTCCGATGGATCA---GCGACAAGAGCTCGACCTTC 28955 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 ||| | | || || || ||||| || || |||||||| ||||| || || |||||| Sbjct 28954 GCCATGCGACTGATTGCCTTCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCCTTTGCA 28895 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| ||||||| || || || ||||| || || ||||| ||||||| | Sbjct 28894 TCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCTGGTCTCACGTTCTCCAACGAGCTC 28835 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145 || ||||||||||| || | || || || || |||||||| ||| ||||||| | Sbjct 28834 ATCTCGCGCGACGAAGGCATGCACACCGACTTCGCGTGCCTGCTGTTCTCTCACCTGAAG 28775 Query 58146 AATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAAT 58205 || || || | || | | | | ||| ||| |||||| || |||||||| | Sbjct 28774 AACAAGCCCTCAAAGGCTGTCGTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAG 28715 Query 58206 GAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCA 58265 ||||| | || || ||||| || || | ||||| |||||| | | | |||| Sbjct 28714 GAGTTCCTGACAGACGCCCTCCCCTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGC 28655 Query 58266 AAGTACATTGAGTTTGTTGCCGACAGACTTTTGCT--CGAACTGATTGGAGAGCGTCATT 58323 |||||||||| ||||| |||||| | || | || || | | ||| || | Sbjct 28654 CAGTACATTGAATTTGTGGCCGACCGTCTGCTCCTGGCGCTCGGCAACCAGAAGTTC--T 28597 Query 58324 ACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACT 58383 ||||| | | || ||||| || || ||| | |||||||| | |||||||| |||| Sbjct 28596 ACAACGCCACCAACCCGTTCGACTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACT 28537 Query 58384 TTTTC 58388 | ||| Sbjct 28536 TCTTC 28532 >seq1917 Length=9250 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || ||||| || ||||| || | || || ||| | || |||| || Sbjct 9165 TTCGTCAAGACACTCACAGGAAAGACGATTACGCTAGAAGTGGAATCCTCAGACACGATC 9106 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | || || | || |||||||| || | || || |||||||||||||| Sbjct 9105 GACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTG 9046 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| ||||| ||||||||||| | ||| || || || |||||||| || Sbjct 9045 ATTTTCGCAGGCAAGCAGTTGGAAGATGGTCGTACTTTGTCAGACTACAACATTCAGAAG 8986 Query 31382 GAATCGACTCTTCATCTGGT 31401 || ||||| || |||| Sbjct 8985 GAGAGCACTCTGCACTTGGT 8966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755105393840