Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq721 374 8e-99
seq1032 230 2e-55
seq1917 82.4 7e-11
>seq721
Length=104476
Score = 374 bits (414), Expect = 8e-99
Identities = 662/956 (69%), Gaps = 12/956 (1%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|| ||||||||||||||||| || || || | |||||||| | || || || ||
Sbjct 60611 GATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCAC 60552
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
| ||| | ||| ||||| || | ||| |||||||||| || || ||| | ||||
Sbjct 60551 AAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCC 60492
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||| ||| | || ||| ||||| ||| | || | || || ||| ||
Sbjct 60491 TTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTTCCAGAATGGCATACCAGATC 60432
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
||||||| | ||| ||| | ||| || | ||||||| |||||| ||| | | |
Sbjct 60431 TTCTGAGCACGCACA-GTCTCGCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTC 60373
Query 23266 GTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGAC 23324
|| |||||| ||||||| ||| || || || ||||| | | | || ||||| ||
Sbjct 60372 CTCGAATTCGTCACCGTACACA-TCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGG 60314
Query 23325 TCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384
|||| | || | ||| || || |||| || ||||| || ||||| || ||| |||
Sbjct 60313 TCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGA 60254
Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444
|||| ||||| ||||| || || || || ||| |||||| | ||||| || |
Sbjct 60253 ACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTTCTTGCGTAGATCCATGAAAGAAA 60194
Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504
|| || || ||||| |||||||| |||| |||||| ||||| || | ||| ||||| |
Sbjct 60193 TGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCAC 60134
Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGG 23564
| |||||||| ||||| || ||||||||||| || | ||||| || | || |||||||
Sbjct 60133 CTTGATCGACATAACGAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGG 60074
Query 23565 ACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAAC 23624
| | |||| ||| || | || || | || |||| |||||| || || ||
Sbjct 60073 ATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGAC 60014
Query 23625 CTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCT 23684
| || || || | || || ||||| ||||| |||||| || ||||| || ||||
Sbjct 60013 CGATACCACCAGCATTCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCT 59954
Query 23685 CGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAG 23744
| |||||||| ||||| | ||| | ||| || |||| || || | || ||||||
Sbjct 59953 CAATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTAC 59894
Query 23745 CGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTAC 23803
| || ||||||||| || ||||| || ||||| ||||||||| ||| |||||
Sbjct 59893 CAGCGCTGAACAGTGTTGGTGATGCGTGTGTGAAGTACTTATTCGACATGTAG-TTGTAT 59835
Query 23804 GTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATG 23863
|| ||||||||||| || || || |||||||| || |||| || || ||||| ||||||
Sbjct 59834 GTCTCGATGGCGGCCTCGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATG 59775
Query 23864 TATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920
| || ||||||| ||||| | ||| | || || ||| ||||| || | | |
Sbjct 59774 TGCTGCGGTCTCTCGGCGACCTT---GCCATCGATCCGGAGCAGGTATGAGCGCTCTAGC 59718
Query 23921 GTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
||||| || ||||| || | ||||| || || | |||| || ||||| || ||
Sbjct 59717 GTTTTGAAGCCAAAGTATTGGTAGTTGAAATCTCTGTCGTAGACAATGGCAGAGTT 59662
>seq1032
Length=45607
Score = 230 bits (254), Expect = 2e-55
Identities = 563/845 (67%), Gaps = 20/845 (2%)
Strand=Plus/Minus
Query 57555 ATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTC 57614
||||||| | | | || |||||||||||||| ||||| |||||||| || ||||| | |
Sbjct 29367 ATTGAAT-TGAACAGATATGGAACATGTACAAGAAGGCCGAAGCATCATTCTGGACTGCC 29309
Query 57615 GAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC---CCTCAAAGAATCTGAG 57671
|| || | || || || ||||||||| || ||| | ||||| || |||
Sbjct 29308 GAGGAGATTGATCTATCAAAGGATCTGCATGACTGGAACAAGCGCCTCACCGACGACGAG 29249
Query 57672 AGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAG 57731
| || || ||| || | || || ||||||||||| ||||| || || ||||||
Sbjct 29248 CGTTTCTTCATCTCACATGTTCTTGCATTCTTCGCCGCATCAGATGGCATCGTCAACGAG 29189
Query 57732 AATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGA 57791
|| |||| ||| | || |||||| ||| | || || ||||||| || |||
Sbjct 29188 AACCTGGTGGAACGCTTCAGCGCCGAAGTGACAGTACCCGAAGCACGATGCTTCTATGGA 29129
Query 57792 TTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC 57851
|| || | || || ||| | || || || | || || || |||||||| || |||
Sbjct 29128 TTCCAGATCATGATGGAGAACATCCACTCGGAGACATACTCCCTCCTCATCGACACATAC 29069
Query 57852 GTGAAGGA---CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG 57908
| | || ||| || | ||| || ||||||||||| ||||| | || ||
Sbjct 29068 ATTAGCGAGCCCAA--ACAACGAACATAC-CTGTTCAACGCCATCGACAATATCCCTTGC 29012
Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACG---TTC 57965
||| || ||||| || ||| || || |||||| | ||| || | | || |||
Sbjct 29011 ATCCGCAGAAAGGCGGACTGGGCACTCCGATGGATCA---GCGACAAGAGCTCGACCTTC 28955
Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025
||| | | || || || ||||| || || |||||||| ||||| || || ||||||
Sbjct 28954 GCCATGCGACTGATTGCCTTCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCCTTTGCA 28895
Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085
| || || ||| ||||||| || || || ||||| || || ||||| ||||||| |
Sbjct 28894 TCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCTGGTCTCACGTTCTCCAACGAGCTC 28835
Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145
|| ||||||||||| || | || || || || |||||||| ||| ||||||| |
Sbjct 28834 ATCTCGCGCGACGAAGGCATGCACACCGACTTCGCGTGCCTGCTGTTCTCTCACCTGAAG 28775
Query 58146 AATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAAT 58205
|| || || | || | | | | ||| ||| |||||| || |||||||| |
Sbjct 28774 AACAAGCCCTCAAAGGCTGTCGTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAG 28715
Query 58206 GAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCA 58265
||||| | || || ||||| || || | ||||| |||||| | | | ||||
Sbjct 28714 GAGTTCCTGACAGACGCCCTCCCCTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGC 28655
Query 58266 AAGTACATTGAGTTTGTTGCCGACAGACTTTTGCT--CGAACTGATTGGAGAGCGTCATT 58323
|||||||||| ||||| |||||| | || | || || | | ||| || |
Sbjct 28654 CAGTACATTGAATTTGTGGCCGACCGTCTGCTCCTGGCGCTCGGCAACCAGAAGTTC--T 28597
Query 58324 ACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACT 58383
||||| | | || ||||| || || ||| | |||||||| | |||||||| ||||
Sbjct 28596 ACAACGCCACCAACCCGTTCGACTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACT 28537
Query 58384 TTTTC 58388
| |||
Sbjct 28536 TCTTC 28532
>seq1917
Length=9250
Score = 82.4 bits (90), Expect = 7e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || ||||| || ||||| || | || || ||| | || |||| ||
Sbjct 9165 TTCGTCAAGACACTCACAGGAAAGACGATTACGCTAGAAGTGGAATCCTCAGACACGATC 9106
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | || || | || |||||||| || | || || ||||||||||||||
Sbjct 9105 GACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTG 9046
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| ||||| ||||| ||||||||||| | ||| || || || |||||||| ||
Sbjct 9045 ATTTTCGCAGGCAAGCAGTTGGAAGATGGTCGTACTTTGTCAGACTACAACATTCAGAAG 8986
Query 31382 GAATCGACTCTTCATCTGGT 31401
|| ||||| || ||||
Sbjct 8985 GAGAGCACTCTGCACTTGGT 8966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445755105393840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |