Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq721 122 8e-23 >seq721 Length=104476 Score = 122 bits (134), Expect = 8e-23 Identities = 423/644 (66%), Gaps = 37/644 (6%) Strand=Plus/Minus Query 148262 GTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACACTCGTCGGGGCA 148321 |||||| ||||||||||| | || || ||| | |||||||||||||| |||||| Sbjct 60381 GTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGACACTCGTTGGGGCA 60322 Query 148322 CATCAATGACCATT-TCCCTCCTGTCTTTACCCTCTTCATAAACAGATCAGGTGTCCACA 148380 ||||| | ||||| | | |||| | || | |||||| |||||||| || |||||| Sbjct 60321 CATCAGGGTCCATTCGGCGTTCTGT-TCCACACGCTTCATGAACAGATCGGGGATCCACA 60263 Query 148381 TGGCAAAAAGAAGATCGCGAGC--------CTTCATATCCTCGGCACCCATATTGCGCTT 148432 ||| || | || |||||||| |||| | ||| || | ||||| Sbjct 60262 GGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGG-----TTCTTGCG--- 60211 Query 148433 TAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTCATGGCGCC 148492 |||||||| |||| || || || |||||||| ||||||| || | || | ||||| Sbjct 60210 TAGATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCC 60151 Query 148493 ---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGC-ATGCTATTAAAAACACGCAATG 148548 | | || || ||||||||||||| || ||| || | || | ||||| | | Sbjct 60150 AGGACGCTTGTTGCCACCTTGATCGACATAACG-AGCTGTGTTGTTGTAGACACG--AAG 60094 Query 148549 CAGGTCCCAATCCCGCC----GCAGTTCCGTTTGTGGATTCAATTTTACTAT-TGGTGGC 148603 || | |||| ||| | || ||||| ||| ||| | || || |||||| Sbjct 60093 CA--TGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAA-TGTAGGATCCGGTGGC 60037 Query 148604 GCGAATTTGAGTGACA-TTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAAT 148662 ||||||| |||||| || || ||||| || || | | || || ||||| || ||| Sbjct 60036 ACGAATTT-TGTGACAGTTGAGACCGATACCACCAGCATTCTTTGAGATCATAGCGCAAA 59978 Query 148663 CGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACG 148722 || ||||| | || || || | ||| ||||| |||| |||| | ||| |||| | Sbjct 59977 TTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAG 59918 Query 148723 ATGACATTTGAGGCATT-TTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAAC 148781 | | || || | | || | | |||| || || ||||| ||||| ||||| Sbjct 59917 AAGCCAACTG-GCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGATGCGTGTGTGAAG 59859 Query 148782 AGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATC 148841 ||| | ||| | | || | ||||| ||| ||||| || || || ||||| Sbjct 59858 TACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATCGTCTCCGTGAATT 59799 Query 148842 TGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGACGAC 148885 | ||||||||||| | |||||| || || |||||| |||| Sbjct 59798 CCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTCGGCGAC 59755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650271891440