Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq721 297 5e-75
>seq721
Length=104476
Score = 297 bits (328), Expect = 5e-75
Identities = 1122/1735 (65%), Gaps = 58/1735 (3%)
Strand=Plus/Plus
Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513
|||||||| ||| | |||||||| || | || || || | ||| | || |||||
Sbjct 59767 CCGCAGCACATGATCATGCGTGTAGCAGTCGGAATTCACGGAGACGATATCGAGGCCGCC 59826
Query 363514 ATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----TTCACGCACGCCACGCCAACAA 363568
|| || ||||| || ||| || ||| || ||||| ||||| | ||||||
Sbjct 59827 ATCGAGACATACAA----CTACATG-TCGAATAAGTACTTCACACACGCATCACCAACAC 59881
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
||| || ||||| || | || ||| || |||||||||| || | | ||||| |
Sbjct 59882 TGTTCAGCGCTGGTACGCCGAACGGCCAGTTGGCTTCTTGCTTCCTCATCGACATGAAAG 59941
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
|||| ||| ||||| || | || ||||| || | ||| ||| | || || |||||||
Sbjct 59942 ACGACAGCATTGAGGGAATTTACGATACACTGAAAATTTGCGCTATGATCTCAAAGAATG 60001
Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746
| || || || ||| | | | || |||| ||||||| || | | | ||||| ||
Sbjct 60002 CTGGTGGTATCGGTCTCAACTGTC-ACAAAATTCGTGCCACCGGATCCT-ACATTGCTGG 60059
Query 363747 CAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
||| | || | | || || || ||| |||||||||||||||| | |||| || ||
Sbjct 60060 CACGAACGGCACA-TCCAACGGCCTGATTCCCATGCTTCGTGTCTACAACAACACAGCTC 60118
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| || ||||| || ||||| ||||| || || ||||| || |||||||||||
Sbjct 60119 GTTATGTCGATCAAGGTGGCAACAAGCGTCCTGGCGCTTTTGCCATTTATCTCGAGCCAT 60178
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925
|| |||||| | || || | || || || || ||| ||||| || ||| | |
Sbjct 60179 GGCACGCCGATGTCATTTCTTTCATGGATCTACGCAAGAACCACGGAAAGGAAGAAGTTC 60238
Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985
| || || || ||||||| || || ||| | | || | || |||||||| |||||
Sbjct 60239 GCGCTCGCGACCTGTTCTTCGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTGGA-A 60297
Query 363986 CAGGTAA----GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041
||| || ||| ||| | || | ||||| |||| ||||| |||||| | |||||
Sbjct 60298 CAG--AACGCCGAA-TGGACCCTGATGTGCCCCAACGAGTGTCCCGGTCTTGCTGATGTG 60354
Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
| |||||||| | | | || ||| || || || || || || ||
Sbjct 60355 TACGGTGACGAATTCGAGGAGCTTTACACTCGCTACGAGAAAGAAGGTCGGGGACGCGAG 60414
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| | | || |||||| | |||| |||||| |||| | |||| ||||| || |
Sbjct 60415 ACTGTGCGTGCTCAGAAGATCTGGTATGCCATTCTGGAAGCCCAGACGGAGACTGGCGGA 60474
Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221
|| | || | ||||| ||| | |||||||||| ||||||| || | || || ||
Sbjct 60475 CCTTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTCGGAACG 60534
Query 364222 ATTCAGCAGAG---CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278
| ||| |||| |||| | || || ||||| || || ||||| || || || ||
Sbjct 60535 A-TCA--AGAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAAGTC 60591
Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AG-ATGGTACT 364332
|||||||| || ||||| || | || || || | | ||| | || | | |
Sbjct 60592 GCCGTATGCAATCTTGCATCTCTTGCTCTGCCAACCTATGTCGACCTCGAGAACGAGAAG 60651
Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCA--TGCT-ACTTGCAATCTCGACAAG 364389
|||||| |||| | || |||| || ||| || | || ||||| |||||
Sbjct 60652 TTTGACTTCCAGAAGCTGCATGAGGT---TGTTCAGGTGGTCACCAAGAATCTGAACAAG 60708
Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449
| ||||| || | |||||| | || || ||| || || ||||| || |
Sbjct 60709 ATCATCGAGGTCAACCACTATCCAGTGCCAGAGGCCAAGAAGAGCAACATGCGCCACAGG 60768
Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCAT 364507
|| || ||||||||||| || || ||||| | || | ||||| ||| |||
Sbjct 60769 CCCATCGGTCTTGGTGTTAGCGGTCTTGCTGATGCCTTCCT--TGCTCTTCGTATGCCAT 60826
Query 364508 TTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCG 364567
| || ||||| || ||||||| || || | ||||||| || || || || ||| |
Sbjct 60827 TCGAGTCGCCCGAGGCTCGTGAGCTGAACATCCAGATCTTCGAGACCATCTACCATGCTG 60886
Query 364568 CAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGT 364627
| | || || || |||||| |||| || | || ||| || ||||| || |
Sbjct 60887 CTCTTACCGCCTCTTGTGATCTGGCCAAGAAGCTTGGTCCTTACGAGACCTATGAAGGTT 60946
Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687
| || | || |||| | | |||| ||| | ||| || || || || | | |
Sbjct 60947 CTCCAGTCTCAAAGGGCGAGCTTCAGTACGATATGTGGGGCGTTACCCCGTCAGATCTTT 61006
Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCG 364744
|| | ||||| | | |||| || |||||||| || ||||| ||||
Sbjct 61007 GGGATTGGGACTCATTGAAGGCCAAGATTGCTGAGCATGGTGTGCGAAACTCTTTGCTCG 61066
Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804
|| || || ||||| || || || ||| |||||||| | || |||||||||||| |
Sbjct 61067 TT---GCTCCTATGCCTACCGCATCCACTTCACAGATCATGGGCTTCAACGAGTGCTTTG 61123
Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864
|||||| || |||||| | ||||| || || || ||| | || ||||| | |||||| |
Sbjct 61124 AACCGTACACCAGCAATATCTATTCGCGACGTGTGCTTGCTGGCGAATTCCAGGTAGTCA 61183
Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924
| | | |||||||||| ||| || || || ||| || | |||||||||
Sbjct 61184 ACCCATGGTTGCTCAAGGATCTGGTCGATCGTGGTCTTTGGTCCGAGAACATGAAGAATC 61243
Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984
||||| || | | || ||| | ||| | ||| || || ||||| |||
Sbjct 61244 GCATCATTGCTGATGGAGGGTCTATTCAGCGTGTGCCAAACATTGGCGACGATCTCAAGG 61303
Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCG 365041
| | ||||| ||||| |||||||| | ||| | ||||| | ||||| ||||
Sbjct 61304 CCCTCTACAAGACCGTGTGGGAAATCAGCCAGCGCA---ACATTGTCCAGATGGCTGCCG 61360
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
|||| ||||| || ||| |||| |||| || ||| | | ||| |||| |||
Sbjct 61361 ATCGTGGTGCCTTCATCGATCAGTCCCAGAGCTTGAACATCCACTTGAAGGAGCCTACCA 61420
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| | || |||||| ||| ||| ||||| || || ||||||||
Sbjct 61421 TGGGCAAGATCACGAGCATGCACTTCACCGGCTGGAAGCTTGGCCTCAAGACAGG 61475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303319750685114
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |