Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq721 297 5e-75 >seq721 Length=104476 Score = 297 bits (328), Expect = 5e-75 Identities = 1122/1735 (65%), Gaps = 58/1735 (3%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 |||||||| ||| | |||||||| || | || || || | ||| | || ||||| Sbjct 59767 CCGCAGCACATGATCATGCGTGTAGCAGTCGGAATTCACGGAGACGATATCGAGGCCGCC 59826 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----TTCACGCACGCCACGCCAACAA 363568 || || ||||| || ||| || ||| || ||||| ||||| | |||||| Sbjct 59827 ATCGAGACATACAA----CTACATG-TCGAATAAGTACTTCACACACGCATCACCAACAC 59881 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| || ||||| || | || ||| || |||||||||| || | | ||||| | Sbjct 59882 TGTTCAGCGCTGGTACGCCGAACGGCCAGTTGGCTTCTTGCTTCCTCATCGACATGAAAG 59941 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| ||| ||||| || | || ||||| || | ||| ||| | || || ||||||| Sbjct 59942 ACGACAGCATTGAGGGAATTTACGATACACTGAAAATTTGCGCTATGATCTCAAAGAATG 60001 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | || || || ||| | | | || |||| ||||||| || | | | ||||| || Sbjct 60002 CTGGTGGTATCGGTCTCAACTGTC-ACAAAATTCGTGCCACCGGATCCT-ACATTGCTGG 60059 Query 363747 CAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 ||| | || | | || || || ||| |||||||||||||||| | |||| || || Sbjct 60060 CACGAACGGCACA-TCCAACGGCCTGATTCCCATGCTTCGTGTCTACAACAACACAGCTC 60118 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | || ||||| || ||||| ||||| || || ||||| || ||||||||||| Sbjct 60119 GTTATGTCGATCAAGGTGGCAACAAGCGTCCTGGCGCTTTTGCCATTTATCTCGAGCCAT 60178 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || |||||| | || || | || || || || ||| ||||| || ||| | | Sbjct 60179 GGCACGCCGATGTCATTTCTTTCATGGATCTACGCAAGAACCACGGAAAGGAAGAAGTTC 60238 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || || || ||||||| || || ||| | | || | || |||||||| ||||| Sbjct 60239 GCGCTCGCGACCTGTTCTTCGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTGGA-A 60297 Query 363986 CAGGTAA----GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041 ||| || ||| ||| | || | ||||| |||| ||||| |||||| | ||||| Sbjct 60298 CAG--AACGCCGAA-TGGACCCTGATGTGCCCCAACGAGTGTCCCGGTCTTGCTGATGTG 60354 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 | |||||||| | | | || ||| || || || || || || || Sbjct 60355 TACGGTGACGAATTCGAGGAGCTTTACACTCGCTACGAGAAAGAAGGTCGGGGACGCGAG 60414 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || | | || |||||| | |||| |||||| |||| | |||| ||||| || | Sbjct 60415 ACTGTGCGTGCTCAGAAGATCTGGTATGCCATTCTGGAAGCCCAGACGGAGACTGGCGGA 60474 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | || | ||||| ||| | |||||||||| ||||||| || | || || || Sbjct 60475 CCTTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTCGGAACG 60534 Query 364222 ATTCAGCAGAG---CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 | ||| |||| |||| | || || ||||| || || ||||| || || || || Sbjct 60535 A-TCA--AGAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAAGTC 60591 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AG-ATGGTACT 364332 |||||||| || ||||| || | || || || | | ||| | || | | | Sbjct 60592 GCCGTATGCAATCTTGCATCTCTTGCTCTGCCAACCTATGTCGACCTCGAGAACGAGAAG 60651 Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCA--TGCT-ACTTGCAATCTCGACAAG 364389 |||||| |||| | || |||| || ||| || | || ||||| ||||| Sbjct 60652 TTTGACTTCCAGAAGCTGCATGAGGT---TGTTCAGGTGGTCACCAAGAATCTGAACAAG 60708 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449 | ||||| || | |||||| | || || ||| || || ||||| || | Sbjct 60709 ATCATCGAGGTCAACCACTATCCAGTGCCAGAGGCCAAGAAGAGCAACATGCGCCACAGG 60768 Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCAT 364507 || || ||||||||||| || || ||||| | || | ||||| ||| ||| Sbjct 60769 CCCATCGGTCTTGGTGTTAGCGGTCTTGCTGATGCCTTCCT--TGCTCTTCGTATGCCAT 60826 Query 364508 TTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCG 364567 | || ||||| || ||||||| || || | ||||||| || || || || ||| | Sbjct 60827 TCGAGTCGCCCGAGGCTCGTGAGCTGAACATCCAGATCTTCGAGACCATCTACCATGCTG 60886 Query 364568 CAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGT 364627 | | || || || |||||| |||| || | || ||| || ||||| || | Sbjct 60887 CTCTTACCGCCTCTTGTGATCTGGCCAAGAAGCTTGGTCCTTACGAGACCTATGAAGGTT 60946 Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687 | || | || |||| | | |||| ||| | ||| || || || || | | | Sbjct 60947 CTCCAGTCTCAAAGGGCGAGCTTCAGTACGATATGTGGGGCGTTACCCCGTCAGATCTTT 61006 Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCG 364744 || | ||||| | | |||| || |||||||| || ||||| |||| Sbjct 61007 GGGATTGGGACTCATTGAAGGCCAAGATTGCTGAGCATGGTGTGCGAAACTCTTTGCTCG 61066 Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804 || || || ||||| || || || ||| |||||||| | || |||||||||||| | Sbjct 61067 TT---GCTCCTATGCCTACCGCATCCACTTCACAGATCATGGGCTTCAACGAGTGCTTTG 61123 Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864 |||||| || |||||| | ||||| || || || ||| | || ||||| | |||||| | Sbjct 61124 AACCGTACACCAGCAATATCTATTCGCGACGTGTGCTTGCTGGCGAATTCCAGGTAGTCA 61183 Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924 | | | |||||||||| ||| || || || ||| || | ||||||||| Sbjct 61184 ACCCATGGTTGCTCAAGGATCTGGTCGATCGTGGTCTTTGGTCCGAGAACATGAAGAATC 61243 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 ||||| || | | || ||| | ||| | ||| || || ||||| ||| Sbjct 61244 GCATCATTGCTGATGGAGGGTCTATTCAGCGTGTGCCAAACATTGGCGACGATCTCAAGG 61303 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCG 365041 | | ||||| ||||| |||||||| | ||| | ||||| | ||||| |||| Sbjct 61304 CCCTCTACAAGACCGTGTGGGAAATCAGCCAGCGCA---ACATTGTCCAGATGGCTGCCG 61360 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 |||| ||||| || ||| |||| |||| || ||| | | ||| |||| ||| Sbjct 61361 ATCGTGGTGCCTTCATCGATCAGTCCCAGAGCTTGAACATCCACTTGAAGGAGCCTACCA 61420 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||| ||| ||| ||||| || || |||||||| Sbjct 61421 TGGGCAAGATCACGAGCATGCACTTCACCGGCTGGAAGCTTGGCCTCAAGACAGG 61475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303319750685114