Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 140 7e-28
seq751 96.9 7e-15
seq215 89.7 1e-12
>seq1032
Length=45607
Score = 140 bits (154), Expect = 7e-28
Identities = 264/383 (69%), Gaps = 4/383 (1%)
Strand=Plus/Plus
Query 251565 GAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGC 251624
|||||| || | |||||| |||| ||||| ||||||||||||||| ||||| |||||
Sbjct 28532 GAAGAAGTTGGTCTTGCCACCCAGCGAGATATTCTCCATGAAGTCGAACGGGTTGGTGGC 28591
Query 251625 ATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATA 251684
||||| ||| | | ||| || || | || | ||||| |||||||| || | ||
Sbjct 28592 GTTGTAGAACTTCTGGTTGCCGAGCGCCAGGAGCAGACGGTCGGCCACAAATTCAATGTA 28651
Query 251685 CTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGATGA 251743
||| | ||| || | || ||||||||| | | | || || || | || || | ||
Sbjct 28652 CTGGCACATGAGCTTAGCGTTCATGCCGAGGAGTGCG-CAGGGGAGGGCGTCTGTCAGGA 28710
Query 251744 ATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGCT 251803
| |||| ||| | ||||| ||||| | | || || || ||| || |||
Sbjct 28711 ACTCCTGCTCGATCGCAACGGCCTCGACGATGATGCTCTGTACGACAGCCTTTGAGGGCT 28770
Query 251804 TGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862
|||||| ||| | ||| |||| | || ||| || | | ||||| || ||||||||
Sbjct 28771 TGTTCTTCAGGTGAGAGAACAGCAGGCACGCGAAGTCGGT-GTGCATGCCTTCGTCGCGC 28829
Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922
||||| ||||||||| | || |||||||| | ||||| ||| | |||||||||
Sbjct 28830 GAGATGAGCTCGTTGGAGAACGTGAGACCAGGCATGAGACCACGCTTCTTCAGCCAGAAG 28889
Query 251923 ATTGCGCAAAAGGATCCAGAGAA 251945
|| | ||||||||| |||||
Sbjct 28890 ATGGATGCAAAGGATCCGGAGAA 28912
>seq751
Length=30195
Score = 96.9 bits (106), Expect = 7e-15
Identities = 250/371 (67%), Gaps = 10/371 (3%)
Strand=Plus/Minus
Query 87554 TGAAGAAGGCCGGCAATCTTCGCGATGCTTTTGCCAAGAC-GAGCGCACCATTCTTTGTC 87612
||||||||||||| || || ||| || ||||||| || || || | ||||| |
Sbjct 10554 TGAAGAAGGCCGGAAACCTCCGCTGGGCCTTTGCCAGAACAGAAGGCGAC-TTCTTCACC 10496
Query 87613 ATCTTCGATGCTGACTTCTGCCCGCGCAAGGACTTCATCACGGAAATTAT-GCCATACTT 87671
|| || ||||| |||||||| || || |||||| | ||| | || |||| | |
Sbjct 10495 ATTTTTGATGCCGACTTCTGTCCACGACCTGACTTCCTGCAGGAGACCATACCCATTCAT 10436
Query 87672 CAACTATGACAAATCCATCGCCATCGTCCAGACCCCCCAGTTCTTTGAGGTGCGTC--CA 87729
||| ||| | || || || || ||||| || |||||||| || | || ||
Sbjct 10435 CAAGCCAGAC-CAGACACGGCTATTGTGCAGACTCCGCAGTTCTT--CCGTACATCTACA 10379
Query 87730 GACCAGACTTGGGTAGAGCGTGCTGCAGGTTCTGTCCAGGAACTGTTCTACCGCTTCATC 87789
|||||||| ||||| |||| | || || | || ||||| ||||||| || || ||
Sbjct 10378 GACCAGACATGGGTTGAGCAAGGAGCTGGAGCCGTGCAGGAGTTGTTCTATCGAGTCGTC 10319
Query 87790 CAGGTGTCTCGCGAATCATTT-GGCGCTGCAGTGTGCGTGGGTACTTGTGCTATGTATCG 87848
||||| ||| |||| ||| ||||| | | || || || | |||| |||||||
Sbjct 10318 CAGGTCAACCGC-AATCGTTTCGGCGCATCCATCTGTGTAGGCAGCAATGCTGTGTATCG 10260
Query 87849 TCGCGAGGCCCTGGTGCCATTTGGCGGCACTGCTGAAATCGGTTTCAGCGAGGATGTCCA 87908
|| | || ||||| | || || || || || || || ||| |||||||| ||
Sbjct 10259 ACGAGCCGCGCTGGTCGAGGTAGGGGGTACGGCAGAGATTGGCTTCTCAGAGGATGTTCA 10200
Query 87909 CACCGGTTTCT 87919
|||||| ||||
Sbjct 10199 CACCGGCTTCT 10189
>seq215
Length=91810
Score = 89.7 bits (98), Expect = 1e-12
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
|||| |||||||||||||| || || |||||| | ||||| || || |||||||| |
Sbjct 34212 TCATCGGACCCAATGGTGCCGGCAAATCTACCATGATCAAGGTTCTTACTGGCGA-AGTT 34154
Query 280234 AGGCCACTGAGGGGTC-CGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
| || | ||| |||| ||| ||||||||| ||| |||| || | ||| || ||
Sbjct 34153 ATCCCGCAGAGTGGTCGAGTTGAGAAGCATCCAAACTTGCGTATAGGCTACATCAAACAA 34094
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
||||| || | ||| | ||| || || || | ||| || || ||||| |||| |||
Sbjct 34093 CACGCCTTGGAGCACGTTGAGCTTCATCTTGAGAAGACACCCAATCAATATCTTCAATGG 34034
Query 280353 CGCTATGC 280360
|| || ||
Sbjct 34033 CGTTACGC 34026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027810106114707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |