Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 309 6e-79
seq721 167 4e-36
>seq1032
Length=45607
Score = 309 bits (342), Expect = 6e-79
Identities = 591/860 (69%), Gaps = 27/860 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|| ||| ||||||||||||||| | || |||||| |||||||||||||| ||
Sbjct 29353 ATATGGAACATGTACAAGAAGGCCGAAGCATCATTCTGGACTGCCGAGGAGATTGATCTA 29294
Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416
| ||||| | | |||| | | || | || |||| || ||| || |
Sbjct 29293 TCAAAGGATCTGCATGACTGGAACAAGCGCCTCACCGACGACGAGCGTTTCTTCATCTCA 29234
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
| | || || ||||||||||| || || ||||| ||||| |||||||||| |
Sbjct 29233 CATGTTCTTGCATTCTTCGCCGCATCAGATGGCATCGTCAACGAGAACCTGGTGGAACGC 29174
Query 42477 TTCATGAAAGAGGTG-CAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| || ||| |||||| || || || |||||||| || |||||||| ||
Sbjct 29173 TTCAGCGCCGAAGTGACAGTACCC-GAAGCACGATGCTTCTATGGATTCCAGATCATGAT 29115
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| ||| || || || |||| ||||| || |||
Sbjct 29114 GGAGAACATCCACTCGGAGACATACTCCCTCCTCATCGACACATACATTAGCGAGCCCAA 29055
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655
| || | |||||||| ||||| || | || || |||||| | ||||||||
Sbjct 29054 ACAACGAACATACCTGTTCAACGCCATCGACAATATCCCTTGCATCCGCAGAAAGGCGGA 28995
Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714
|||||| ||| |||||| || | | || | | || |||| | | | ||| | ||||
Sbjct 28994 CTGGGCACTCCGATGGATC-AGCGACAAGAGCTCGACCTTCGCCATGCGACTGATTGCCT 28936
Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774
| | || || || || ||||||||||| || |||| || |||||||||||||| |||
Sbjct 28935 TCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCCTTTGCATCCATCTTCTGGCTGAAGA 28876
Query 42775 AG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGG 42833
|| ||| || ||||| || ||||| ||||| ||||| |||||| | ||||| ||
Sbjct 28875 AGCGTGGTCTC-ATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGGC 28817
Query 42834 CTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAG 42893
|||| | ||||| || ||||| |||||||| ||||| | | |||||||||| |||
Sbjct 28816 ATGCACACCGACTTCGCGTGCCTGCTGTTCTC---TCACCTGAAGAACAAGCCCTCAAAG 28760
Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAG 42953
| || | | ||||||| |||||||| | ||||||| |||||||||| || |
Sbjct 28759 GCTGTCGTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCCTGACAGAC 28700
Query 42954 TCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTAC 43013
| || ||| | || ||||||||||| | ||||||||| ||||||| | |
Sbjct 28699 GCCCTCCCCTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAATTT 28640
Query 43014 GTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCG 43067
|| ||||||| ||| || || ||| ||| || || |||||||| | |
Sbjct 28639 GTGGCCGACCGTCTGCT---CC---TGGCGCTCGGCAACCAGAAGTTCTACAACGCCACC 28586
Query 43068 TGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAA---CTTTTTCGAG 43124
||| |||||||| |||||||| |||||| ||| ||||||||||| ||| ||||||
Sbjct 28585 AACCCGTTCGACTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTTCTTCTTCGAG 28526
Query 43125 AAGCGCGTCGCCGACTACCA 43144
|||||||| | ||||||||
Sbjct 28525 AAGCGCGTTGGAGACTACCA 28506
>seq721
Length=104476
Score = 167 bits (184), Expect = 4e-36
Identities = 829/1310 (63%), Gaps = 34/1310 (3%)
Strand=Plus/Minus
Query 244297 GCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTA 244356
||||||||| || |||| ||| ||||| ||| || || || |||||| |||
Sbjct 60987 GCCCCACATATCGTACTGAAGCTCGCCCTTTGAGACTGGAGAACCTTCATAGGTCTCGTA 60928
Query 244357 GGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTC 244416
||||| || |||||| | ||| || || || || | ||||||||||||
Sbjct 60927 AGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGCAGCATGGTAGATGGTCTC 60868
Query 244417 GAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCAT 244476
||||||| |||||| || || |||| | | ||| || || | | |
Sbjct 60867 GAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGAATGGCATACGAAGAGCAAG 60808
Query 244477 GAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCG 244536
|||| | || || || || || || | |||||||| ||||| ||| |||||
Sbjct 60807 GAAGGCATCAGCAAGACCGCTAACACCAAGACCGATGGGCCTGTGGCGCATGTTGCTCTT 60748
Query 244537 CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGAT 244596
| |||| || ||||| || || |||| | ||||| | |||||| || || |||||
Sbjct 60747 CTTGGCCTCTGGCACTGGATAGTGGTTGACCTCGATGATCTTGTTCAGATTCTTGGTGAC 60688
Query 244597 CATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGT 244656
|| | || || || |||| ||| ||||| ||| | | | |||| |
Sbjct 60687 CACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAACTTCTCG---TTCTCGAGG----- 60636
Query 244657 GATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGA 244716
|| || | | | ||| || | || | || ||||| ||||| || || || |
Sbjct 60635 --TCGACATAGGTTGGCAGAGCAAGA-GATG-CAAGATTGCATACGGCGACTTCATC--A 60582
Query 244717 GTTG--GTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGC 244774
| || ||||||| || ||||| ||||| | ||| || |||||| || || || | |
Sbjct 60581 GGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTC 60522
Query 244775 TGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCG 244834
| || ||| |||| |||| || ||||||||||| ||||| || || || |||||
Sbjct 60521 TTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCC 60462
Query 244835 AGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTG 244894
|||||| | || | | | ||||| | | ||| || ||| ||| ||
Sbjct 60461 GTCTGGGCTTCCAGAATGGCATACCAGATCTTCTGAGCACGCACAGTCTCGCGTCCCCGA 60402
Query 244895 CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGG 244954
|| ||| ||||||||| ||||| || ||||||| ||| || | || || | ||
Sbjct 60401 CCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGA 60342
Query 244955 CCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATG 245014
||||| ||| |||||||| || |||| ||| || | | || | || ||||
Sbjct 60341 CCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACGCTTCATG 60282
Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074
|| || ||||||||||| ||||| ||| ||||| | | | || ||| ||
Sbjct 60281 AACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCG 60222
Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134
|||||| | || |||| || || ||| ||| ||||||| ||||| | || |
Sbjct 60221 TGGTTCTTGCGTAGATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAGATAAATG 60162
Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTT 245190
|| | ||||| || ||||||||||| || || || | | | ||||| |||
Sbjct 60161 GCAAAAGCGCCAGGACGCTTGTTGCCACCTTGATCGA----CATAACGAGCTGTGTTGTT 60106
Query 245191 GAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGC 245250
| ||| || || | || | | |||||| || |||||| ||||| |||||||
Sbjct 60105 GTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAATGTAGGA 60046
Query 245251 GCCCTTGCCCCTGAGGTTGCTGA---TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGAT 245307
|| || | | || || ||| | || | || | || || || | ||| |||||
Sbjct 60045 TCCGGTGGCAC-GAATTTTGTGACAGTTGAGA--CCGATACCACCAGCATTCTTTGAGAT 59989
Query 245308 GAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAG 245367
| ||||| | || | || || || ||||| |||||||| ||||||| ||
Sbjct 59988 CATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGAT 59929
Query 245368 CAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGC 245427
|| ||||| || | || |||| || || | | | | ||||||| || || ||
Sbjct 59928 GAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGATGC 59869
Query 245428 GTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTC 245487
||| || ||||| |||| | | | ||| |||| || || ||||| | |||
Sbjct 59868 GTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATCGTC 59809
Query 245488 GCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTC 245547
||||| || | || | ||||| ||||||| || ||||| | | || |
Sbjct 59808 TCCGTGAATTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTCG--GCGACCTTG 59751
Query 245548 GGGTC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595
|| | ||||| ||| |||||||| ||||| ||||| ||||||||
Sbjct 59750 CCATCGATCCGGAGCAGGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTA 59701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944315272805520
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