Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq721 125 9e-24
seq1032 96.9 4e-15
seq11 82.4 9e-11
>seq721
Length=104476
Score = 125 bits (138), Expect = 9e-24
Identities = 609/958 (64%), Gaps = 17/958 (2%)
Strand=Plus/Minus
Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430
||||| | | | || ||||| |||||||| |||| | ||||| ||||| | | |
Sbjct 60716 TCGATGATCTTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAG 60657
Query 114431 TCAAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 114489
||||| || | || ||| | |||||| | || || || | || || ||||| ||
Sbjct 60656 TCAAA-CTTCTCGTTCTCGAGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCA 60598
Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549
|| | | ||||| |||||||||| || || || || ||||| || || |||||
Sbjct 60597 TACGGCGACTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTT 60538
Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609
|| || || | ||||| || || ||| ||| ||||||||||| || ||| |
Sbjct 60537 GATCGTTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAA 60478
Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668
|| || |||||||| |||| | ||||| || | ||||| | || | || |||
Sbjct 60477 AGGTCCGCCAGTCTCCGTCTGGGCTTCCAGAATGGCATACCAGATCTTCTG-AGCACGCA 60419
Query 114669 CAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCAC 114728
|||| || | || || || | |||||| ||||| || | || || || ||||
Sbjct 60418 CAGTCTCGCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCAC 60359
Query 114729 CCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCT 114788
| | || | || || || || | ||||| | || | ||||| | ||
Sbjct 60358 CGTACACATCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCT 60299
Query 114789 CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGC 114848
|| |||||||||||||| || || |||||||| || || |||| || || ||| ||
Sbjct 60298 GTTCCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGC 60239
Query 114849 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 114908
|| ||||||| | || || || || | |||| || |||| ||| |||||||
Sbjct 60238 GAACTTCTTCCTTTCCGTGGTTCTTGCGTAGATCCATGAAAGAAATGACATCGGCGTGCC 60179
Query 114909 ACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACAT 114962
| || || || || | || | | || | |||| ||| | || | ||||
Sbjct 60178 ATGGCTCGAGATAAATGGCAAAAGCGCC---AGGACGCTTGTTGCCACCTTGATCGACAT 60122
Query 114963 ACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG 115022
| | |||||| || | || |||||||| ||||| | || | ||| ||| || |
Sbjct 60121 AACGAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCG 60062
Query 115023 TCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTG 115082
| || ||| || |||| | | | || || | ||| ||||| || |
Sbjct 60061 TGCCAGCAATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATACCACCAG 60002
Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142
| ||||||||| ||||| | || | |||| || || || || |||
Sbjct 60001 CATTCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGT 59942
Query 115143 CCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT-GGTGTACCAGCGTTGAAG 115201
| || | |||| |||||||| | || || | | || || ||||||||| ||||
Sbjct 59941 CTTTCATGTCGATGAGGAAGCAAGAAGCCAACTG-GCCGTTCGGCGTACCAGCGCTGAAC 59883
Query 115202 AGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC 115260
|| ||||||| ||||| |||| ||| | | ||||| | | ||| ||||| | | |
Sbjct 59882 AGTGTTGGTGATGCGTGTGTGAA-GTACTTATTCGACATGTAGTTGTATGTCTCGATGGC 59824
Query 115261 GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318
||| || || || |||||||| |||| | || ||||| | ||||| || |||
Sbjct 59823 GGCCTCGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATGTGCTGCGGT 59766
>seq1032
Length=45607
Score = 96.9 bits (106), Expect = 4e-15
Identities = 296/452 (65%), Gaps = 23/452 (5%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAG---TTTGTCTTCCCGTCCAAGCTGATATTCTC 125814
|||||| ||||| ||||||||||||||| || ||||| || ||| |||||||||
Sbjct 28508 GTAGTCTCCAACGCGCTTCTCGAAGAAGAAGTTGGTCTTGCCACCCAGCGAGATATTCTC 28567
Query 125815 CATAAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCAATCTGTTTGAGGA 125873
||| || || || ||||| | | ||| | || | ||| || | | ||| |
Sbjct 28568 CATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAG-CGCCAGGAGCA 28626
Query 125874 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGT 125933
|||| || | || | |||||||||| |||| || || |||||| |||| |||
Sbjct 28627 GACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGGAGTG 28686
Query 125934 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGG 125993
|| ||||| ||||| | |||| ||| ||| || | ||||| || ||||||
Sbjct 28687 CGCAGGGGAGGGCGTCTGTCAGGAACTCCTGCTCGATCGCAACGGCCTCG---ACGATG- 28742
Query 125994 CGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-GGC 126048
||| | | || ||| | | || |||| | |||| | | |||
Sbjct 28743 -----ATGCTCTGTACGACAGCCTTTGAGGGCTTGTTCTTCAGGTGAGAGAACAGCAGGC 28797
Query 126049 A----AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104
| || || ||| | || ||||| || |||||||| || || ||||| || |
Sbjct 28798 ACGCGAAGTCGGTGTGCATGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGAC 28857
Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164
| ||||||||||| |||||||||| |||||| || | ||| || || ||||||||||
Sbjct 28858 CAGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGA 28917
Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGC 126196
| || || || ||||| |||| || |||
Sbjct 28918 TACCTTCAACTGCAGCGAAGGCAATCAGTCGC 28949
>seq11
Length=17923
Score = 82.4 bits (90), Expect = 9e-11
Identities = 108/148 (73%), Gaps = 4/148 (3%)
Strand=Plus/Minus
Query 173699 AACTCCGAAGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAA-- 173756
||||| | || || |||||||| | ||| |||||||| ||||| || |||||| |
Sbjct 9988 AACTCGGTCGAGTATATGTTCGTGAGCTTCGCACCGTAACCATTACGACCACCAGTCACT 9929
Query 173757 TTCTCTTCTTGTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAATGTAAGTTCTG 173816
||| |||| || || |||||||| | || | || || ||||| | | ||| |
Sbjct 9928 TTCGCTTC--GTCATCGTCGTAGTTCGACGAGGTCAACAGATGTCCAAAAATCATTTCAG 9871
Query 173817 GATTCCAAATACCCTCCTTTTCGTGCAT 173844
|| |||||||||||||||| ||||||||
Sbjct 9870 GAATCCAAATACCCTCCTTGTCGTGCAT 9843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597338464553160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |