Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1917 111 2e-19 >seq1917 Length=9250 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 |||||||||||||| |||| ||||||||||| ||||| ||||| || | || ||| || Sbjct 8957 AAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGA 9016 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 | || || | |||||| || ||||| || || ||||||||||| | ||| | | |||| Sbjct 9017 CCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCC 9076 Query 42111 TTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 42169 |||| | ||| | || | || | | | | |||||| |||||||| || | ||| Sbjct 9077 TTGT-CTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGT 9135 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199 || || || || || || ||||| || || Sbjct 9136 AATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543199036345680