Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 111 2e-19
>seq1917
Length=9250
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050
|||||||||||||| |||| ||||||||||| ||||| ||||| || | || ||| ||
Sbjct 8957 AAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGA 9016
Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110
| || || | |||||| || ||||| || || ||||||||||| | ||| | | ||||
Sbjct 9017 CCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCC 9076
Query 42111 TTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 42169
|||| | ||| | || | || | | | | |||||| |||||||| || | |||
Sbjct 9077 TTGT-CTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGT 9135
Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199
|| || || || || || ||||| || ||
Sbjct 9136 AATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543199036345680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |