Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1917 86.0 6e-12 seq1019 82.4 8e-11 >seq1917 Length=9250 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| |||| | || || | ||||| | ||||||||| || || Sbjct 8984 TCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAA 9043 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||||||||| || || ||||| || || ||||| || || ||| ||| Sbjct 9044 ATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTTGCTCTTCACATTG 9103 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || || |||||||||| || | ||||| || || | || || ||| Sbjct 9104 TCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACG 9163 Query 64433 AA 64434 || Sbjct 9164 AA 9165 >seq1019 Length=44428 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||||||||| || | || ||||| |||| || |||||||||||| Sbjct 44419 GTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCG 44360 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTC 64344 ||| | || | ||||||||||| |||||||| || || Sbjct 44359 GCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTC 44322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632140249880