Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 86.0 6e-12
seq1019 82.4 8e-11
>seq1917
Length=9250
Score = 86.0 bits (94), Expect = 6e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || ||||||||||| |||| | || || | ||||| | ||||||||| || ||
Sbjct 8984 TCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAA 9043
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||||||||| || || ||||| || || ||||| || || ||| |||
Sbjct 9044 ATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTTGCTCTTCACATTG 9103
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || || |||||||||| || | ||||| || || | || || |||
Sbjct 9104 TCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACG 9163
Query 64433 AA 64434
||
Sbjct 9164 AA 9165
>seq1019
Length=44428
Score = 82.4 bits (90), Expect = 8e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||||||||| || | || ||||| |||| || ||||||||||||
Sbjct 44419 GTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCG 44360
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTC 64344
||| | || | ||||||||||| |||||||| || ||
Sbjct 44359 GCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTC 44322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499632140249880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |