Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq721 233 2e-56
>seq721
Length=104476
Score = 233 bits (258), Expect = 2e-56
Identities = 609/918 (66%), Gaps = 8/918 (1%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| ||||||||| || ||| || ||||| ||| ||| ||||||
Sbjct 59692 AACTACCAATACTTTGGCTTCAAAACGCTAGAGCGCTCATACCTGCTCCGGATCGATGGC 59751
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| ||||| ||||||| || || | ||||| || || |||| |||||||| ||
Sbjct 59752 AAGGTCGCCGAGAGACCGCAGCACATGATCATGCGTGTAGCAGTCGGAATTCACGGAGAC 59811
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| || | | | | | | || ||||| | | ||| | || ||
Sbjct 59812 GATATCGAGGCCGCCATCGAGACATACAACTACATGTCGAATAAGTACTTCACACACGCA 59871
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || ||||||| ||| || || ||| ||| || |||| || ||||| ||
Sbjct 59872 TCACCAACACTGTTCAGCGCTGGTACGCCGAACGGCCAGTTGGCTTCTTGCTTCCTCATC 59931
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | || | |||| ||| ||||||| ||| | || || || || | ||
Sbjct 59932 GAC-ATGAAAGACGACAGCATTGAGGGAATTTACGATACACTGAAAATTTGCGCTATGAT 59990
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAG-TGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||||| | || || || ||||| ||| |||| || | | ||||||| || ||||
Sbjct 59991 CTCAAAGAATGCTGGTGGTATCGGTCTCAACTGTC-ACAAAATTCGTGCCACCGGATCCT 60049
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| || || || ||||| ||||||||||| | || ||||| || |||| |||||
Sbjct 60050 ACATTGCTGGCACGAACGGCACATCCAACGGCCTGATTCCCATGCTTCGTGTCTACAACA 60109
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || || || || || || ||||| | | | || |||| || | ||||
Sbjct 60110 ACACAGCTCGTTATGTCGATCAAGGTGGCAACAAGCGTCCTGGCGCTTTTGCCATTTATC 60169
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||||| || || ||||||| || || || ||||||||||| || |
Sbjct 60170 TCGAGCCATGGCACGCCGATGTCATTTCTTTCATGGATCTACGCAAGAACCACGGAAAGG 60229
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | | || | ||||| |||| ||| || ||| | || || || || ||||| |
Sbjct 60230 AAGAAGTTCGCGCTCGCGACCTGTTCTTCGCCCTGTGGATCCCCGATCTGTTCATGAAGC 60289
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || || | ||| ||| |||| || | || ||||| || |||||||| || | |
Sbjct 60290 GTGTGGAACAGAACGCCGAATGGACCCTGATGTGCCCCAACGAGTGTCCCGGTCTTGCTG 60349
Query 94373 ACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGC 94430
| || | || | || || || || | || |||| ||||| | | ||| | ||
Sbjct 60350 ATGTGTACGG-TGACGAATTCGAGGAGCTTTACACTCGCTACGAGAAAGAAGGTCGGGGA 60408
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| | || | || |||| |||| | ||| || || |||| | ||| ||||||
Sbjct 60409 C-GCGAGACTGTGCGTGCTCAGAAGATCTGGTATGCCATTCTGGAAGCCCAGACGGAGAC 60467
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|| || | |||| | | |||||| ||| |||| |||| ||||||| || | ||
Sbjct 60468 TGGCGGACCTTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCT 60527
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
||| |||||||||||| || ||||||| ||||| ||||||| ||| | || || ||
Sbjct 60528 CGGAACGATCAAGAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGA 60587
Query 94611 GATTGCTGTGTGTAACCT 94628
| || || || || ||
Sbjct 60588 AGTCGCCGTATGCAATCT 60605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494710664950920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |