Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq721 233 2e-56 >seq721 Length=104476 Score = 233 bits (258), Expect = 2e-56 Identities = 609/918 (66%), Gaps = 8/918 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||||||| || ||| || ||||| ||| ||| |||||| Sbjct 59692 AACTACCAATACTTTGGCTTCAAAACGCTAGAGCGCTCATACCTGCTCCGGATCGATGGC 59751 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| ||||| ||||||| || || | ||||| || || |||| |||||||| || Sbjct 59752 AAGGTCGCCGAGAGACCGCAGCACATGATCATGCGTGTAGCAGTCGGAATTCACGGAGAC 59811 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || || | | | | | | || ||||| | | ||| | || || Sbjct 59812 GATATCGAGGCCGCCATCGAGACATACAACTACATGTCGAATAAGTACTTCACACACGCA 59871 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || ||||||| ||| || || ||| ||| || |||| || ||||| || Sbjct 59872 TCACCAACACTGTTCAGCGCTGGTACGCCGAACGGCCAGTTGGCTTCTTGCTTCCTCATC 59931 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | || | |||| ||| ||||||| ||| | || || || || | || Sbjct 59932 GAC-ATGAAAGACGACAGCATTGAGGGAATTTACGATACACTGAAAATTTGCGCTATGAT 59990 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAG-TGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||||| | || || || ||||| ||| |||| || | | ||||||| || |||| Sbjct 59991 CTCAAAGAATGCTGGTGGTATCGGTCTCAACTGTC-ACAAAATTCGTGCCACCGGATCCT 60049 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| || || || ||||| ||||||||||| | || ||||| || |||| ||||| Sbjct 60050 ACATTGCTGGCACGAACGGCACATCCAACGGCCTGATTCCCATGCTTCGTGTCTACAACA 60109 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || || || || || ||||| | | | || |||| || | |||| Sbjct 60110 ACACAGCTCGTTATGTCGATCAAGGTGGCAACAAGCGTCCTGGCGCTTTTGCCATTTATC 60169 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| |||||||| || || ||||||| || || || ||||||||||| || | Sbjct 60170 TCGAGCCATGGCACGCCGATGTCATTTCTTTCATGGATCTACGCAAGAACCACGGAAAGG 60229 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | ||||| |||| ||| || ||| | || || || || ||||| | Sbjct 60230 AAGAAGTTCGCGCTCGCGACCTGTTCTTCGCCCTGTGGATCCCCGATCTGTTCATGAAGC 60289 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || || | ||| ||| |||| || | || ||||| || |||||||| || | | Sbjct 60290 GTGTGGAACAGAACGCCGAATGGACCCTGATGTGCCCCAACGAGTGTCCCGGTCTTGCTG 60349 Query 94373 ACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGC 94430 | || | || | || || || || | || |||| ||||| | | ||| | || Sbjct 60350 ATGTGTACGG-TGACGAATTCGAGGAGCTTTACACTCGCTACGAGAAAGAAGGTCGGGGA 60408 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | | || | || |||| |||| | ||| || || |||| | ||| |||||| Sbjct 60409 C-GCGAGACTGTGCGTGCTCAGAAGATCTGGTATGCCATTCTGGAAGCCCAGACGGAGAC 60467 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || || | |||| | | |||||| ||| |||| |||| ||||||| || | || Sbjct 60468 TGGCGGACCTTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCT 60527 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| |||||||||||| || ||||||| ||||| ||||||| ||| | || || || Sbjct 60528 CGGAACGATCAAGAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGA 60587 Query 94611 GATTGCTGTGTGTAACCT 94628 | || || || || || Sbjct 60588 AGTCGCCGTATGCAATCT 60605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494710664950920