Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 176 4e-39
seq721 158 1e-33
>seq1032
Length=45607
Score = 176 bits (194), Expect = 4e-39
Identities = 357/523 (68%), Gaps = 28/523 (5%)
Strand=Plus/Minus
Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC---CGCC 52385
|| ||| | |||| |||||| | |||||| | |||||| ||||||| | |
Sbjct 29017 CCTTGCATCCGCAGAAAGGCGGACTGGGCACTCCGATGGATC---AGCGACAAGAGCTCG 28961
Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445
|| | ||| ||| || | |||||||| ||| || || | || || ||||| |
Sbjct 28960 ACCTTCGCCATGCGACTGATTGCCTTCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCC 28901
Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505
||||| ||||||| | | || | | || | ||||| || || |||||| ||||
Sbjct 28900 TTTGCATCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCTGGTCTCACGTTCTCCAAC 28841
Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC---TACT---AC 52559
||| | || |||||||||||||| ||||||| ||||| |||||||| | || ||
Sbjct 28840 GAGCTCATCTCGCGCGACGAAGGCATGCACACCGACTTCGCGTGCCTGCTGTTCTCTCAC 28781
Query 52560 AAGACGCGCGTGACCGAAAAATTGGAT-TCGGACACGATCCTGAGCATGTTCAAGGAGGC 52618
|| | | | || ||| || | ||| ||| |||||| || |||||
Sbjct 28780 CTGAAGAACAAGCCCTCAAA---GGCTGTCGTACA-------GAGCATCATCGTCGAGGC 28731
Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678
|| || ||||| ||||||| | || | ||| || || || || || ||||||||
Sbjct 28730 CGTTGCGATCGAGCAGGAGTTCCTGACAGACGCCCTCCCCTGCGCACTCCTCGGCATGAA 28671
Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738
||| || ||||||| ||||||| || |||||||| || |||||| | || ||||||
Sbjct 28670 CGCTAAGCTCATGTGCCAGTACATTGAATTTGTGGCCGACCGTCTGCTCCTGGCGCTCGG 28611
Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797
|| ||| |||| || |||||| ||| ||||| || || ||| | || || ||||| |
Sbjct 28610 -CAACCAGAAGTTCTACAACGCCACCAACCCGTTCGACTTCATGGAGAATATCTCGCTGG 28552
Query 52798 AGGGCAAGACCAA---CTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||||||||| ||| ||||||||||| || || || ||
Sbjct 28551 GTGGCAAGACCAACTTCTTCTTCGAGAAGCGCGTTGGAGACTA 28509
>seq721
Length=104476
Score = 158 bits (174), Expect = 1e-33
Identities = 922/1454 (63%), Gaps = 47/1454 (3%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || || ||||| || | ||| |||| | |||| | |||||| ||| | |
Sbjct 61186 GGTTGACTACCTGGAATTCGCCAGCAAGCACACGTCGCGAATAGATATTGCTGGTGTACG 61127
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
|||||||| | ||||| ||| | || || | |||| |||||| ||||| || |
Sbjct 61126 GTTCAAAGCACTCGTTGAAGCCCATGATCTGTGAAGTGGATGCGGTAGGCATAGGAGCAA 61067
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
| | |||||| || |||| || ||| | ||| | | ||||||| | | ||||||||
Sbjct 61066 CGAGCAAAGAGTTTCGCACACCATGCTCAGCAATCTTGGCCTTCAATGAGTCCCAATCCC 61007
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCC--TCGACTGGCGGG 153265
| || | ||||| || || |||||| |||||||| | | | || | || | | ||
Sbjct 61006 AAAGATCTGACGGGGTAACGCCCCACATATCGTACTGAAGCTCGCCCTTTGA--GACTGG 60949
Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGT-TGGGCCAGTTCGCAGCTAGCCTCGA 153324
| || || | || ||| || || | | |||||| || || || |
Sbjct 60948 AGAACCTTCATAGGTCTCGTAAGGACCAA-GCTTCTTGGCCAGATCACAAGAGGCGGTAA 60890
Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384
| || ||| ||| ||||| ||| ||| || | || || | || || ||
Sbjct 60889 GAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACT 60830
Query 153385 CGTACGGCATGCGCAGCAGCACA-AAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443
|| | ||||| || || |||| ||||| || || ||||| | ||| | ||||||
Sbjct 60829 CGAATGGCATACGAAG-AGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGATG 60771
Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCG-CTCGCTATGGGATAGTGATTGCGATCGAT 153502
|| | || | |||||| | | || || || ||| |||||| ||| |||||
Sbjct 60770 GGCCTGTGGCGCATGTTGCTCTTCTTGGCCTCTGGCACTGG-ATAGTGGTTGACCTCGAT 60712
Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562
|| ||||| || || ||||| | | | | | | || |||| ||| ||| |
Sbjct 60711 GATCTTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAA 60652
Query 153563 GGTCATTTCGTCGACGCGTACG-CATCGATT--CACGGCAATAGACGCCAGATTACAGAC 153619
|| |||| || | || ||| | || || |||| ||| || ||||| || ||
Sbjct 60651 CTTC---TCGTTCTCGAGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATAC 60595
Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679
||| || || | | |||||| | |||||| | ||| | |||| || || ||
Sbjct 60594 GGCGACTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGAT 60535
Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739
|| | ||| | ||| ||||| ||||| ||| || || ||| |||| ||| | ||
Sbjct 60534 CGTTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGG 60475
Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGTC--CTGCGCTCGCACC 153797
|||||| ||||| || | ||| | || | || ||| || ||| || |||||
Sbjct 60474 TCCGCCAGTCTCCGTCTGGGCTTCCAGAATGG-CATAC-CAGATCTTCTGAGCACGCACA 60417
Query 153798 CGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCG 153857
|| || || || || ||||||| || ||| || ||| || ||||| |||
Sbjct 60416 GTCTCGCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCG 60357
Query 153858 TAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCG 153917
|| || || || |||||||||| | || |||||||| | ||| ||||||
Sbjct 60356 TACACATCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCAT------TCGGCG 60303
Query 153918 TTG------ACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGC 153971
|| || || |||||||||||| || | ||| || ||| | | ||||||||
Sbjct 60302 TTCTGTTCCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGA 60243
Query 153972 GCCTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGA-GCACGCTATAGATGT 154026
|| | | | || | || || |||||| |||| | | | | || || |
Sbjct 60242 GCGC-GAACTTCTTCCTTTCCGTGGTTCTTGCGT---AGATCCATGAAAGAAAT-GACAT 60188
Query 154027 CGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGAT 154083
|||||||||| || || | || | ||| | || || |||||| || || ||||
Sbjct 60187 CGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCACCTTGAT 60128
Query 154084 CGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGC 154143
|||| | || | | |||||| |||| || | |||||| ||||||| | | ||||
Sbjct 60127 CGACATAACGAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGC 60068
Query 154144 CGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGC 154203
|||| || | || | | ||| ||| || | || || ||| | || || |
Sbjct 60067 CGTTCGTGCCAGCAATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATAC 60008
Query 154204 CGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGC 154263
| || | | |||||| || |||||| ||| || ||| || || || ||||
Sbjct 60007 CACCAGCATTCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGC 59948
Query 154264 TATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCG 154323
| ||||| | | ||| | ||| || ||| || || | |||| || ||
Sbjct 59947 TGTCGTCTTTCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTACCAGCGC 59888
Query 154324 AAAAGAGGGTGGGACTCGCGTGCGTAAAC-AGTTTTTGGCTCATCATGCGGTACGTTTCG 154382
|| || || || ||||| || || | || || | ||| | ||| || |||
Sbjct 59887 TGAACAGTGTTGGTGATGCGTGTGTGAAGTACTTATTCGA-CATGTAGTTGTATGTCTCG 59829
Query 154383 ATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGC 154442
|||||| | |||||||| || |||||||| |||| || || ||||||| ||||||||||
Sbjct 59828 ATGGCGGCCTCGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATGTGCTGC 59769
Query 154443 GGACGTTCGGCGAC 154456
|| | ||||||||
Sbjct 59768 GGTCTCTCGGCGAC 59755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496249825951440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |