Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq721 118 2e-21 >seq721 Length=104476 Score = 118 bits (130), Expect = 2e-21 Identities = 343/521 (66%), Gaps = 18/521 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| | |||||| ||||||||||| || ||| | | || | || || |||||| Sbjct 60570 CTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCT 60511 Query 204943 CTTGCGGTTA-CAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATC 205001 ||||||||| ||| | |||||||| | ||||| || || ||||| |||| | | Sbjct 60510 CTTGCGGTTGGCAGCA-TCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTT 60452 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCAC----TTGCTTCACGTACATCCCTTGA 205057 ||||||| ||| | | |||| ||| | || || | || | | || Sbjct 60451 CCAGAATGGCATACCAGATCTTCTGAGCACGCACAGTCTCGCGTCCCCGACCTTCTTT-- 60394 Query 205058 GACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGA 205117 |||||| ||||| ||| || | || || ||||||||| || || || ||| Sbjct 60393 --CTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGA 60336 Query 205118 CATTTTTTGGGACACATCAGAGACCACATCTGA-TCGTCTTTCACCCTCTCCATAAACAG 205176 || | ||||| |||||||| | ||| || | | | || ||| | || ||| ||||| Sbjct 60335 CACTCGTTGGGGCACATCAGGGTCCAT-TCGGCGTTCTGTTCCACACGCTTCATGAACAG 60277 Query 205177 GTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTT 205236 ||| |||||||||| || | ||||| || || || | || | | || | ||| |||| Sbjct 60276 ATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTT 60217 Query 205237 CTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTCTAACCACACGGC 205293 ||| | |||| ||| |||| ||||||||||| ||||| | | | ||| Sbjct 60216 CTTGCGTAGATCCATGAAAGA---AATGACATCGGCGTGCCATGGCTCGAGATAAATGGC 60160 Query 205294 CATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAAC 205353 | ||||| || | |||||| ||||| || || || |||| | |||| | || Sbjct 60159 AAAAGCGCCAGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGAC 60100 Query 205354 TCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGC 205394 || ||||| || | ||| ||||||| || |||||||||| Sbjct 60099 ACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGC 60059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795135052755120