Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq721 118 2e-21
>seq721
Length=104476
Score = 118 bits (130), Expect = 2e-21
Identities = 343/521 (66%), Gaps = 18/521 (3%)
Strand=Plus/Minus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
||| | |||||| ||||||||||| || ||| | | || | || || ||||||
Sbjct 60570 CTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCT 60511
Query 204943 CTTGCGGTTA-CAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATC 205001
||||||||| ||| | |||||||| | ||||| || || ||||| |||| | |
Sbjct 60510 CTTGCGGTTGGCAGCA-TCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTT 60452
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCAC----TTGCTTCACGTACATCCCTTGA 205057
||||||| ||| | | |||| ||| | || || | || | | ||
Sbjct 60451 CCAGAATGGCATACCAGATCTTCTGAGCACGCACAGTCTCGCGTCCCCGACCTTCTTT-- 60394
Query 205058 GACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGA 205117
|||||| ||||| ||| || | || || ||||||||| || || || |||
Sbjct 60393 --CTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGA 60336
Query 205118 CATTTTTTGGGACACATCAGAGACCACATCTGA-TCGTCTTTCACCCTCTCCATAAACAG 205176
|| | ||||| |||||||| | ||| || | | | || ||| | || ||| |||||
Sbjct 60335 CACTCGTTGGGGCACATCAGGGTCCAT-TCGGCGTTCTGTTCCACACGCTTCATGAACAG 60277
Query 205177 GTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTT 205236
||| |||||||||| || | ||||| || || || | || | | || | ||| ||||
Sbjct 60276 ATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTT 60217
Query 205237 CTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTCTAACCACACGGC 205293
||| | |||| ||| |||| ||||||||||| ||||| | | | |||
Sbjct 60216 CTTGCGTAGATCCATGAAAGA---AATGACATCGGCGTGCCATGGCTCGAGATAAATGGC 60160
Query 205294 CATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAAC 205353
| ||||| || | |||||| ||||| || || || |||| | |||| | ||
Sbjct 60159 AAAAGCGCCAGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGAC 60100
Query 205354 TCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGC 205394
|| ||||| || | ||| ||||||| || ||||||||||
Sbjct 60099 ACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGC 60059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795135052755120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |