Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 127 5e-24
seq1019 89.7 1e-12
>seq1917
Length=9250
Score = 127 bits (140), Expect = 5e-24
Identities = 145/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| ||||| |||||| || | ||||||||| | |||||| | |||||||||| |||
Sbjct 8971 GTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATCTTCCAACTG 9030
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| || ||||| || ||||||||||||||||| ||||| || || ||||||||
Sbjct 9031 CTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTT 9090
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|||||| |||| ||||||| | ||| || || | ||| |||||||| || ||
Sbjct 9091 GCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGTCTTTCCTGT 9150
Query 199606 GAGAGTTTTCACAAA 199620
||| || || || ||
Sbjct 9151 GAGTGTCTTGACGAA 9165
>seq1019
Length=44428
Score = 89.7 bits (98), Expect = 1e-12
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483
||||||||||| |||||||| || | ||||||||||| | || | || || || |||
Sbjct 44428 AGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGC 44369
Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
||||| ||||| ||||| | ||||||||||||||| ||| || ||
Sbjct 44368 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTC 44322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178890982300809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |