Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1917 127 5e-24 seq1019 89.7 1e-12 >seq1917 Length=9250 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| |||||| || | ||||||||| | |||||| | |||||||||| ||| Sbjct 8971 GTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATCTTCCAACTG 9030 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || ||||| || ||||||||||||||||| ||||| || || |||||||| Sbjct 9031 CTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTT 9090 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||||| |||| ||||||| | ||| || || | ||| |||||||| || || Sbjct 9091 GCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGTCTTTCCTGT 9150 Query 199606 GAGAGTTTTCACAAA 199620 ||| || || || || Sbjct 9151 GAGTGTCTTGACGAA 9165 >seq1019 Length=44428 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||||||||| |||||||| || | ||||||||||| | || | || || || ||| Sbjct 44428 AGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGC 44369 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||| ||||| ||||| | ||||||||||||||| ||| || || Sbjct 44368 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTC 44322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178890982300809