Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1917 107 2e-18 seq1019 93.3 5e-14 >seq1917 Length=9250 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 ||||||||||||| |||| || |||||||| || || |||||||| || | ||| || Sbjct 8957 AAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGA 9016 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 | || || | ||||||||| ||||| |||| ||||||||||| | || | | |||| Sbjct 9017 CCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCC 9076 Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 ||||| ||||| |||| | | | | |||||| |||||||| || | ||| Sbjct 9077 TTGTCTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTA 9136 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 || || || || || || || || || || Sbjct 9137 ATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165 >seq1019 Length=44428 Score = 93.3 bits (102), Expect = 5e-14 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || ||||| |||| ||||||||||||||||| || Sbjct 44414 CTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAA 44355 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 ||||||||||||||||| | || | || |||| Sbjct 44354 GATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCC 44321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565224078272040