Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 107 2e-18
seq1019 93.3 5e-14
>seq1917
Length=9250
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435
||||||||||||| |||| || |||||||| || || |||||||| || | ||| ||
Sbjct 8957 AAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGA 9016
Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495
| || || | ||||||||| ||||| |||| ||||||||||| | || | | ||||
Sbjct 9017 CCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCC 9076
Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555
||||| ||||| |||| | | | | |||||| |||||||| || | |||
Sbjct 9077 TTGTCTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTA 9136
Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584
|| || || || || || || || || ||
Sbjct 9137 ATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165
>seq1019
Length=44428
Score = 93.3 bits (102), Expect = 5e-14
Identities = 77/94 (82%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||| || || ||||| |||| ||||||||||||||||| ||
Sbjct 44414 CTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAA 44355
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495
||||||||||||||||| | || | || ||||
Sbjct 44354 GATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCC 44321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565224078272040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |