Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 214 2e-50
seq1917 87.8 2e-12
>seq1032
Length=45607
Score = 214 bits (236), Expect = 2e-50
Identities = 531/794 (67%), Gaps = 19/794 (2%)
Strand=Plus/Plus
Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAG 132722
||| || || || ||||||| | ||||||| ||| | |||||| | | | |||
Sbjct 28568 CATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGCG---CCAGGAG 28624
Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781
||| | ||||||||| || || ||||| || ||||| | || || | | | || || |
Sbjct 28625 CAGACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGCGTTCATG-CCGAGGA 28683
Query 132782 GA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840
| |||| || || || || || || || |||||||| || || || ||| || |
Sbjct 28684 GTGCGCAGGGG-AGGGCGTCTGTCAGGAACTCCTGCTCGATCGCAACGGCCTCGACGATG 28742
Query 132841 ATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900
|| | ||| ||| ||| | | || || ||||| || ||| ||
Sbjct 28743 ATGCTCTGTACGACAGCCTTTGAGGGCTTGTTCTTCAGGTGAGAGAACAGCAGGCACGCG 28802
Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960
|||||| |||| ||| ||||| | || ||||| |||||| ||| || | || |||
Sbjct 28803 AAGTCGGTGTGCATGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGACCAGGC 28862
Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020
||||| || || || || ||||| || |||| || || || || ||||||| ||
Sbjct 28863 ATGAGACCACGCTTCTTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGATACCT 28922
Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080
|| || || ||||| || | ||| ||| | |||| || | ||| | ||||||
Sbjct 28923 TCAACTGCAGCGAAGGCAATCAGTCGCATGGCGAAGGTCGAGCTCTTGTCGCTGATCCAT 28982
Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140
|| || ||||| || |||||| || ||| || || | ||||||||||| ||||
Sbjct 28983 CGGAGTGCCCAGTCCGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGAACAG- 29041
Query 133141 CGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198
| | ||| | || ||| | ||| |||||||||||| || || | ||||
Sbjct 29042 -GTATGTTCGTTGTTTGGGCTCGCTAATGTATGTGTCGATGAGGAGGGAGTATGTCTCCG 29100
Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258
|||| | ||||||||| ||| || || || || ||||| || || ||| || ||
Sbjct 29101 AGTGGATGTTCTCCATCATGATCTGGAATCCATAGAAGCATCGTGCTTCGGGTACTGTCA 29160
Query 133259 CTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317
|||| | || ||| || || ||||| || |||||||||||||| || ||||||||
Sbjct 29161 CTTC-GGCGCTGAAGCGTTCCACCAGGTTCTCGTTGACGATGCCATCTGATGCGGCGAAG 29219
Query 133318 AAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCCAGTCG 133374
|| || || || || |||||| ||||||| |||| | | |||| | ||||||
Sbjct 29220 AATGCAAGAACATGTGAGATGAAGAAACGCTCGTCGTCGGTGAGGCGCTTGTTCCAGTCA 29279
Query 133375 CGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434
|| ||||| || || || | ||||||| | ||||| || || || ||||| || |||
Sbjct 29280 TGCAGATCCTTTGATAGATCAATCTCCTCGGCAGTCCAGAATGATGCTTCGGCCTTCTTG 29339
Query 133435 TACATACTCCACAT 133448
||||| |||| ||
Sbjct 29340 TACATGTTCCATAT 29353
>seq1917
Length=9250
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||| || | ||||| ||||| || |||| ||| ||||| ||| ||||
Sbjct 9081 GACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTGATTTTCGCAGGCAAGCAGTTGGAA 9022
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455
|| | || || | ||||||||||| || ||||| ||| || ||||| |||||| |
Sbjct 9021 GATGGTCGTACTTTGTCAGACTACAACATTCAGAAGGAGAGC-ACTCTGCACTTGGTGTT 8963
Query 38456 GCGTTTGAGAGGCGG 38470
||||||| | || ||
Sbjct 8962 GCGTTTGCGTGGTGG 8948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500160126871680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |