Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1612 156 5e-33 seq721 132 6e-26 seq465 118 1e-21 >seq1612 Length=7758 Score = 156 bits (172), Expect = 5e-33 Identities = 265/384 (69%), Gaps = 0/384 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||||||||||||||| | || ||||| ||||| ||||| || ||||| Sbjct 505 TCACCGGACAGGATGGCGGCTTGGACGGCGGCACCGTAGGCGACGGCCTCGTCTGGGTTG 446 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || | || || ||||| ||| | || || | ||| | || || || ||| Sbjct 445 ATGGAGCGGTTTGGCTCCTTGCCGTTGAAAAAGTCGGAGACCATCTTCTGGATCTTGGGG 386 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | || || || | ||| || || |||||||| | Sbjct 385 ATACGAGTGGACCCACCAACGAGCACAATCTCGTGCACAGAAGACTTGTCGATCTTCGCA 326 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || |||||| ||||| | ||| || || ||| Sbjct 325 TCGCGGAGAGTGCGCTCGACTGGCTCCATAGTAGAGCGGAAGAGATCCTGGCAAAGCTCC 266 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| ||||| || || || || ||||| |||| ||| ||||| | |||||||| Sbjct 265 TCGAAACGGGCACGAGTGATCGAAGTGTAGAAGTCAATGCCCTCGTACAGTGAATCAATC 206 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || || || | ||| || | ||| ||||| || | ||| || || || || Sbjct 205 TCGATGGAGGTCTGAGCAGACGAGGAGAGCGTGCGCTTGGCTCTCTCGCAAGCAGTACGA 146 Query 7370 AAACGACGAAGGGCACGCGGGTTA 7393 | ||| || ||||| || | |||| Sbjct 145 AGACGTCGGAGGGCCCGAGCGTTA 122 >seq721 Length=104476 Score = 132 bits (146), Expect = 6e-26 Identities = 916/1470 (62%), Gaps = 26/1470 (2%) Strand=Plus/Minus Query 104614 TTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGTTTGTTTACG 104673 ||||| | || ||||| || ||||| || || ||| || | || | ||| || Sbjct 61238 TTCATGTTCTCGGACCAAAGACCACGATCGACCAGATCCTTGAGCAACCATGGGTTGACT 61179 Query 104674 ACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATACGGTTCGAAA 104733 || ||||| || || || |||| | ||||||||||| | || |||||||| || Sbjct 61178 ACCTGGAATTCGCCAGCAAGCACACGTCGCGAATAGATATTGCTGGTGTACGGTTCAAAG 61119 Query 104734 CACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGCAAGAAG--AA 104791 ||||||||| || | ||||| || |||||||||||||||||||| |||| || || Sbjct 61118 CACTCGTTGAAGCCCATGATCTGTGAAGTGGATGCGGTAGGCATAGGAGCAACGAGCAAA 61059 Query 104792 GACTATTCATAGTTCCTTTCTTAACAAGTTTACGCATGGCATTCCAATCGTATCGACCAC 104851 || | ||| | || | || | ||| || ||| ||| | || | | | | Sbjct 61058 GAGT-TTCGCACA-CCATGCTCAGCAATCTT------GGCCTTCAATGAGTCCCAATCCC 61007 Query 104852 TAAACTTTG----GGTCTCGATCCCACATATCGAATTGAAGAATACCTTTACTAAACGGT 104907 || | || ||| || ||||||||||| | ||||| || || | || Sbjct 61006 AAAGATCTGACGGGGTAACGC-CCCACATATCGTACTGAAGCTCGCCCTTTGAGACTGGA 60948 Query 104908 GACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACACGACGATTCGAGT 104967 || || | | | || || |||||||| | | | ||| || ||||| || | || Sbjct 60947 GAACCTTCATAGGTCTCGTAAGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGA 60888 Query 104968 GATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCG 105027 | || |||||||| || ||||| || | ||||| || | | | || || || Sbjct 60887 GCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCG 60828 Query 105028 AATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGT 105087 |||| ||| | | | || | ||||| ||||| |||||||| ||||||||| Sbjct 60827 AATGGCATACGAAGAGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGATGGGC 60768 Query 105088 CTGTGACGCATATTTGAACGT-TTCCCGTTTTCGGTTGGGTAAAAGTTTTTATCAATAAC 105146 ||||| ||||| || | | | || | | | ||| || ||| || || | Sbjct 60767 CTGTGGCGCATGTT-GCTCTTCTTGGCCTCTGGCACTGGATAGTGGTTGACCTCGATGAT 60709 Query 105147 CTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTTCATGGTTAAACTC 105206 |||||| | || || |||| | ||| ||| | || | || ||||| Sbjct 60708 CTTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAACTT 60649 Query 105207 GTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGT 105266 | ||||||| || || || |||| | || | ||||| ||||| ||||||||| Sbjct 60648 CTCGTTCTCGAGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGAC 60589 Query 105267 TTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACC 105326 ||| || | || |||| | || ||||| ||||| || || || ||||| || Sbjct 60588 TTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCC 60529 Query 105327 AACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCC 105386 | | || ||||| ||| || || || ||||| || || | || || Sbjct 60528 GAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCC 60469 Query 105387 CGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGCTGGTACAACTTTAGT 105446 || || | |||| || | ||| || | ||| |||| | ||| | ||| | Sbjct 60468 AGTCTCCGTCTGGGCTTCCAGAATGGCATACCAGATCTTCTGAGCACGCACAGTCTCGCG 60409 Query 105447 TGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTC 105506 | | |||||| ||||| |||||| || || || || | ||||||||| || Sbjct 60408 TCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATC 60349 Query 105507 TGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCG 105566 | |||||| || | || || | || | ||| | | | ||| || || Sbjct 60348 AGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACG 60289 Query 105567 TTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTC 105626 |||||||||| ||| || ||||||| ||| | || ||||| ||| | | ||||| Sbjct 60288 CTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTC 60229 Query 105627 ATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAA 105686 | || || ||| || | || | ||| | | ||||||||||||||| || | Sbjct 60228 CTTTCCGTGGTTCTTGCGTAGATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAG 60169 Query 105687 ATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGT 105740 ||| | |||| || || | ||||| || |||||| |||||| | || || Sbjct 60168 ATAAATGGCAAAAGCGCC---AGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGT 60112 Query 105741 TGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAAT 105800 ||| || || || | ||| ||||| | || | |||||| || || || ||| ||| Sbjct 60111 GTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAAT 60052 Query 105801 ATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACT 105860 | ||| | ||||| | | |||| || | || ||||| ||||| ||| Sbjct 60051 GTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATACCACCAGCATTCTTTGA 59992 Query 105861 GATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGC 105920 ||| || || ||| | |||||||||||| || || || || || || || | | Sbjct 59991 GATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTC 59932 Query 105921 AATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGT 105980 || ||||| || || | || || | || |||||||| ||||||| ||||||| Sbjct 59931 GATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGA 59872 Query 105981 TGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATC 106040 ||| || |||| | ||||| | | |||||| || | | || || ||||| Sbjct 59871 TGCGTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATC 59812 Query 106041 GTGTCCATGAATACCAATAGCGACGCGCAT 106070 || ||| ||||| || | || || ||||| Sbjct 59811 GTCTCCGTGAATTCCGACTGCTACACGCAT 59782 >seq465 Length=166670 Score = 118 bits (130), Expect = 1e-21 Identities = 244/360 (68%), Gaps = 11/360 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| || ||||| | ||| || || || || || || | ||| || |||| ||| Sbjct 115095 ATCGAAATCCTCGCCACCAAGGTGAGTGTCTCCGGCAGTTGCCTGGACCTCGAAGACACC 115036 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| | || | || ||||| || ||||| || || || || | ||| Sbjct 115035 CTGGTCAACAGTCAAGATGGAGACATCGAAGGTACCTCCTCCGAGATCGTA------TAC 114982 Query 7576 GTTCGTATCGTCGTCTTTGT---TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | | | | ||||| | |||| ||||| ||||| || | || || || || || Sbjct 114981 GATGATCTGGCGCTCTTTATCCGTCTTGTCGAGGCCGTAGGCCAAGGCGGCGGCGGTGGG 114922 Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || | | ||| || ||| || || ||||| || || | ||||||||||| || Sbjct 114921 CTCGTTGACGACACGGAGGACA-TTAAGACCAGCGATGGTGCCGGCATCTTTCGTAGCGG 114863 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||||| | ||||| |||||||| ||||| || ||||| |||| ||||| || | Sbjct 114862 CACGTTGGGCGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTTGGTGACGGGCTCGC 114803 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | | || ||||| |||| || ||||| ||| |||| ||| || ||||| || |||| Sbjct 114802 CCAAGTAGGATTCGGCGACTTCCTTCATCTTGCCGAGAATCATGGACGAAATTTCCTCAG 114743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635116707322680