Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1612 156 5e-33
seq721 132 6e-26
seq465 118 1e-21
>seq1612
Length=7758
Score = 156 bits (172), Expect = 5e-33
Identities = 265/384 (69%), Gaps = 0/384 (0%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| | | ||||||||||||||| | || ||||| ||||| ||||| || |||||
Sbjct 505 TCACCGGACAGGATGGCGGCTTGGACGGCGGCACCGTAGGCGACGGCCTCGTCTGGGTTG 446
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || | || || ||||| ||| | || || | ||| | || || || |||
Sbjct 445 ATGGAGCGGTTTGGCTCCTTGCCGTTGAAAAAGTCGGAGACCATCTTCTGGATCTTGGGG 386
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | || || || | ||| || || |||||||| |
Sbjct 385 ATACGAGTGGACCCACCAACGAGCACAATCTCGTGCACAGAAGACTTGTCGATCTTCGCA 326
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || || ||||| || |||||| ||||| | ||| || || |||
Sbjct 325 TCGCGGAGAGTGCGCTCGACTGGCTCCATAGTAGAGCGGAAGAGATCCTGGCAAAGCTCC 266
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| ||||| ||||| || || || || ||||| |||| ||| ||||| | ||||||||
Sbjct 265 TCGAAACGGGCACGAGTGATCGAAGTGTAGAAGTCAATGCCCTCGTACAGTGAATCAATC 206
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| |||| || || || | ||| || | ||| ||||| || | ||| || || || ||
Sbjct 205 TCGATGGAGGTCTGAGCAGACGAGGAGAGCGTGCGCTTGGCTCTCTCGCAAGCAGTACGA 146
Query 7370 AAACGACGAAGGGCACGCGGGTTA 7393
| ||| || ||||| || | ||||
Sbjct 145 AGACGTCGGAGGGCCCGAGCGTTA 122
>seq721
Length=104476
Score = 132 bits (146), Expect = 6e-26
Identities = 916/1470 (62%), Gaps = 26/1470 (2%)
Strand=Plus/Minus
Query 104614 TTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGTTTGTTTACG 104673
||||| | || ||||| || ||||| || || ||| || | || | ||| ||
Sbjct 61238 TTCATGTTCTCGGACCAAAGACCACGATCGACCAGATCCTTGAGCAACCATGGGTTGACT 61179
Query 104674 ACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATACGGTTCGAAA 104733
|| ||||| || || || |||| | ||||||||||| | || |||||||| ||
Sbjct 61178 ACCTGGAATTCGCCAGCAAGCACACGTCGCGAATAGATATTGCTGGTGTACGGTTCAAAG 61119
Query 104734 CACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGCAAGAAG--AA 104791
||||||||| || | ||||| || |||||||||||||||||||| |||| || ||
Sbjct 61118 CACTCGTTGAAGCCCATGATCTGTGAAGTGGATGCGGTAGGCATAGGAGCAACGAGCAAA 61059
Query 104792 GACTATTCATAGTTCCTTTCTTAACAAGTTTACGCATGGCATTCCAATCGTATCGACCAC 104851
|| | ||| | || | || | ||| || ||| ||| | || | | | |
Sbjct 61058 GAGT-TTCGCACA-CCATGCTCAGCAATCTT------GGCCTTCAATGAGTCCCAATCCC 61007
Query 104852 TAAACTTTG----GGTCTCGATCCCACATATCGAATTGAAGAATACCTTTACTAAACGGT 104907
|| | || ||| || ||||||||||| | ||||| || || | ||
Sbjct 61006 AAAGATCTGACGGGGTAACGC-CCCACATATCGTACTGAAGCTCGCCCTTTGAGACTGGA 60948
Query 104908 GACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACACGACGATTCGAGT 104967
|| || | | | || || |||||||| | | | ||| || ||||| || | ||
Sbjct 60947 GAACCTTCATAGGTCTCGTAAGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGA 60888
Query 104968 GATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCG 105027
| || |||||||| || ||||| || | ||||| || | | | || || ||
Sbjct 60887 GCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCG 60828
Query 105028 AATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGT 105087
|||| ||| | | | || | ||||| ||||| |||||||| |||||||||
Sbjct 60827 AATGGCATACGAAGAGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGATGGGC 60768
Query 105088 CTGTGACGCATATTTGAACGT-TTCCCGTTTTCGGTTGGGTAAAAGTTTTTATCAATAAC 105146
||||| ||||| || | | | || | | | ||| || ||| || || |
Sbjct 60767 CTGTGGCGCATGTT-GCTCTTCTTGGCCTCTGGCACTGGATAGTGGTTGACCTCGATGAT 60709
Query 105147 CTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTTCATGGTTAAACTC 105206
|||||| | || || |||| | ||| ||| | || | || |||||
Sbjct 60708 CTTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAACTT 60649
Query 105207 GTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGT 105266
| ||||||| || || || |||| | || | ||||| ||||| |||||||||
Sbjct 60648 CTCGTTCTCGAGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGAC 60589
Query 105267 TTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACC 105326
||| || | || |||| | || ||||| ||||| || || || ||||| ||
Sbjct 60588 TTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCC 60529
Query 105327 AACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCC 105386
| | || ||||| ||| || || || ||||| || || | || ||
Sbjct 60528 GAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCC 60469
Query 105387 CGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGCTGGTACAACTTTAGT 105446
|| || | |||| || | ||| || | ||| |||| | ||| | ||| |
Sbjct 60468 AGTCTCCGTCTGGGCTTCCAGAATGGCATACCAGATCTTCTGAGCACGCACAGTCTCGCG 60409
Query 105447 TGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTC 105506
| | |||||| ||||| |||||| || || || || | ||||||||| ||
Sbjct 60408 TCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATC 60349
Query 105507 TGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCG 105566
| |||||| || | || || | || | ||| | | | ||| || ||
Sbjct 60348 AGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACG 60289
Query 105567 TTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTC 105626
|||||||||| ||| || ||||||| ||| | || ||||| ||| | | |||||
Sbjct 60288 CTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTC 60229
Query 105627 ATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAA 105686
| || || ||| || | || | ||| | | ||||||||||||||| || |
Sbjct 60228 CTTTCCGTGGTTCTTGCGTAGATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAG 60169
Query 105687 ATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGT 105740
||| | |||| || || | ||||| || |||||| |||||| | || ||
Sbjct 60168 ATAAATGGCAAAAGCGCC---AGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGT 60112
Query 105741 TGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAAT 105800
||| || || || | ||| ||||| | || | |||||| || || || ||| |||
Sbjct 60111 GTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAAT 60052
Query 105801 ATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACT 105860
| ||| | ||||| | | |||| || | || ||||| ||||| |||
Sbjct 60051 GTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATACCACCAGCATTCTTTGA 59992
Query 105861 GATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGC 105920
||| || || ||| | |||||||||||| || || || || || || || | |
Sbjct 59991 GATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTC 59932
Query 105921 AATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGT 105980
|| ||||| || || | || || | || |||||||| ||||||| |||||||
Sbjct 59931 GATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGA 59872
Query 105981 TGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATC 106040
||| || |||| | ||||| | | |||||| || | | || || |||||
Sbjct 59871 TGCGTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATC 59812
Query 106041 GTGTCCATGAATACCAATAGCGACGCGCAT 106070
|| ||| ||||| || | || || |||||
Sbjct 59811 GTCTCCGTGAATTCCGACTGCTACACGCAT 59782
>seq465
Length=166670
Score = 118 bits (130), Expect = 1e-21
Identities = 244/360 (68%), Gaps = 11/360 (3%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| || ||||| | ||| || || || || || || | ||| || |||| |||
Sbjct 115095 ATCGAAATCCTCGCCACCAAGGTGAGTGTCTCCGGCAGTTGCCTGGACCTCGAAGACACC 115036
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|||| | || | || ||||| || ||||| || || || || | |||
Sbjct 115035 CTGGTCAACAGTCAAGATGGAGACATCGAAGGTACCTCCTCCGAGATCGTA------TAC 114982
Query 7576 GTTCGTATCGTCGTCTTTGT---TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632
| | | | | ||||| | |||| ||||| ||||| || | || || || || ||
Sbjct 114981 GATGATCTGGCGCTCTTTATCCGTCTTGTCGAGGCCGTAGGCCAAGGCGGCGGCGGTGGG 114922
Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691
|| || | | ||| || ||| || || ||||| || || | ||||||||||| ||
Sbjct 114921 CTCGTTGACGACACGGAGGACA-TTAAGACCAGCGATGGTGCCGGCATCTTTCGTAGCGG 114863
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
||||| | ||||| |||||||| ||||| || ||||| |||| ||||| || |
Sbjct 114862 CACGTTGGGCGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTTGGTGACGGGCTCGC 114803
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811
| | || ||||| |||| || ||||| ||| |||| ||| || ||||| || ||||
Sbjct 114802 CCAAGTAGGATTCGGCGACTTCCTTCATCTTGCCGAGAATCATGGACGAAATTTCCTCAG 114743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635116707322680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |