Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq721 187 3e-42 seq537 109 7e-19 seq1032 104 3e-17 >seq721 Length=104476 Score = 187 bits (206), Expect = 3e-42 Identities = 893/1397 (64%), Gaps = 37/1397 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||| || || || || ||||| || | | Sbjct 59767 CCGCAGCACATGATCATGCGTGTAGCAGTCGGAATTCACGGAGACGATATCGAGGCCGCC 59826 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||||||| || | ||||| | ||| |||| |||||| ||||||| || || Sbjct 59827 ATCGAGACATACAACTACATGTCGAATAAGTAC-TTCACACACGCATCACCAACACTGTT 59885 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || ||||||||| || | ||| || | ||| ||||| || | | || || || Sbjct 59886 CAGCGCTGGTACGCCGAACGGCCAGTTGGCTTCTTGCTTCCTCATCGACATGAAAGACGA 59945 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGGGCT 111848 || | || ||||||| || || | ||| ||| | | ||||||||| ||| Sbjct 59946 CAGCATTGAGGGAATTTACGATACACTGAA--AATTTGCGCTATGATCTCAAAGAATGCT 60003 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908 ||||||||||| | || || | | | |||| | || ||| || || Sbjct 60004 GGTGGTATCGGTCTCAACTGTCACAAAATTCGTGCCACCGGATCCTACATTGCTGGCACG 60063 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || ||| | || | ||||| |||||||| || | ||| |||||| || ||| Sbjct 60064 AACGGCACATCCAACGGCCTGATTCCCATGCTTCGTGTCTACAACAACACAGCTCGTTAT 60123 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || | |||| ||| ||||| || || | || | ||||| ||||||||| Sbjct 60124 GTCGATCAAGGTGGCAACAAGCGTCCT---GGCGCTTTTGCCATTTATCTCGAGCCATGG 60180 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 ||||| ||| |||| ||| | || | || ||||| || | || || | ||| Sbjct 60181 CACGCCGATGTCATTTCTTTCATGGATCTACGCAAGAACCACGGAAAGGAAGAAGTTCGC 60240 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | ||||| || |||| ||| || ||||| || ||||| ||||||||| | || || Sbjct 60241 GCT--CGCGACCTGTTCTTCGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTGGAAC 60298 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| | | | ||| | || | || || || || |||||||| | |||| | Sbjct 60299 AGAACGCCGAATGGACCCTGATGTGCCCCAACGAGTGTCCCGGTCTTGCTGATGTGTACG 60358 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC-TGCGACG 112259 |||| || || || | || ||||| |||||| ||||| |||||| ||| | ||| Sbjct 60359 GTGACGAATTCGAGGAGCTTTACACTCGCTACGAGAAAGAAGGTCGGG-GACGCGAGACT 60417 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 |||| ||| | || | | ||| | || ||||| | | || || |||||||| ||| Sbjct 60418 GTGCGTGCT-CAGAAGATCTGGTATGCCATTCTGGAAGCCCAGACGGAGACTGGCGGACC 60476 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | || || ||||| || || |||| ||||| || || |||||| | || ||| Sbjct 60477 TTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTCGGAACGAT 60536 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 |||||| |||||| | || ||||| ||| | || | || | ||||| || || Sbjct 60537 CAAGAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAAGTCGCCGT 60596 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 112498 || || || ||||| | ||||| || | ||||| || | |||| ||| ||||| Sbjct 60597 ATGCAATCTTGCATCTCTTGCTCTGCCAACCTATGTCGACCTCGAGAACGAGAAGTTTGA 60656 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | | || || || || ||| | ||||| || || || |||| | || || Sbjct 60657 CTTCCAGAAGCTGCATGAGGTTGTTCAGGTGGTCACCAAGAATCTGAACAAGATCATCGA 60716 Query 112559 TAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || || || || ||| | | | | | || ||| | ||| | || || | Sbjct 60717 GGTCAACCACTATCCAGTGCCAGAGGCCAAGAAGAGC-AACATGCGCCACAGGCCCATCG 60775 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 |||| ||||| ||||| || |||| ||| || | ||| |||| || || Sbjct 60776 GTCTTGGTGTTAGCGGTCTTGCTGATGCCTTCCTTGCTCTTCGTATGCCATTCGAGTCGC 60835 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 ||| || || | || | || || ||||| || || || || |||||| | Sbjct 60836 CCGAGGCTCGTGAGCTGAACATCCAGATCTTCGAGACCATCTACCATGCTGCTCTTACCG 60895 Query 112738 CGAGTTCGGAGTTGGC--AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 | || || |||| ||| | | |||||| || || |||| ||| |||||||||| Sbjct 60896 CCTCTTGTGATCTGGCCAAGAAGCT--TGGTCCTTACGAGACCTATGAAGGTTCTCCAGT 60953 Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC--AAGCTTCACTACGAC 112853 ||| | || | |||||| | |||||||||| || | || || || | || Sbjct 60954 CTCAAAGGGCGAGCTTCAGTACGATATGTGGG-GCGTTACCCCGTCAG-ATCTTTGGGAT 61011 Query 112854 TGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGG 112911 |||||| | | |||| || ||| | ||| | || ||| ||||| | | | Sbjct 61012 TGGGACTCATTGAAGGCCAAGATTGCTGAGCATGGTGTGCGAAAC--TCTTTGCTCGTTG 61069 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 | || ||||| || || ||||| |||| ||| |||| || || ||||||||||| | Sbjct 61070 CTCCTATGCCTACCGCATCCACTTCACAGATCATGGGCTTCAACGAGTGCTTTGAACCGT 61129 Query 112972 ACACGACGAACATCTAT 112988 |||| | || |||||| Sbjct 61130 ACACCAGCAATATCTAT 61146 >seq537 Length=37262 Score = 109 bits (120), Expect = 7e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115 ||||| | ||||||||||||||| ||||||| ||| || || |||| |||||| Sbjct 22656 TTTCCAATGGCATCAATCTCATCGATGAAGATGATACAAGGCGTGTTTTTGCGAGCATTG 22597 Query 16116 TCAAAGAGATCCCGTACACG-CTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 |||||||||| |||||||| ||||| || |||||||||||||| |||||||| | | Sbjct 22596 GCAAAGAGATCTCGTACACGACTTGGA-CCAACACCAACAAACATTTCCACAAATTCAGA 22538 Query 16175 GGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 | | ||| || ||| || ||| | || || || | || |||||| || || Sbjct 22537 GCCAGAAACGGAGAAGAAAGGCACACCACTCTCGCCTGCTGTAGCCTTGGCGAGGAGCGT 22478 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||| || || || || | | || ||||| || || ||||| ||||| Sbjct 22477 CTTACCAGTTCCGGGAGGTCCTGACAAGATAGCACCACGAGGGATCTTTGCGCC 22424 >seq1032 Length=45607 Score = 104 bits (114), Expect = 3e-17 Identities = 91/111 (82%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262 ||||| |||||||||||||| || ||||| ||| | || | ||||| |||||||| || Sbjct 28927 GTTGAAGGTATCTTCTTCTCCGGATCCTT-TGCATCCATCTTCTGGCTGAAGAAGCGTGG 28869 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||||||| |||||| |||||||||||||| ||||| || ||||| || Sbjct 28868 TCTCATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGG 28818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620726671939440