Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq721 241 2e-58
seq991 100 3e-16
seq1032 82.4 9e-11
>seq721
Length=104476
Score = 241 bits (266), Expect = 2e-58
Identities = 1096/1715 (64%), Gaps = 47/1715 (3%)
Strand=Plus/Minus
Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGA---TGATACACTTTTG 109565
||| |||||||||||||| ||||||||| || ||||| | || || | | || |
Sbjct 61389 CTGGGACTGATCGATGAAGGCACCACGATCGGCAGCCATCTGGACAATGTTGCGCT---G 61333
Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC---CACGAT 109622
||| |||||||| || |||||||| | ||||| ||| ||| ||||| ||| |
Sbjct 61332 GCTGATTTCCCACACGGTCTTGTAGAGGGCCTTGAGATCGTCGCCAATGTTTGGCAC-AC 61274
Query 109623 GTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682
| | ||||||| || ||| | | ||| ||| |||||| | | ||||| |||||
Sbjct 61273 GCT--GAATAGACCCTCCATCAGCAATGATGCGATTCTTCATGTTCTCGGACCAAAGACC 61216
Query 109683 GACCTTTTTGAGATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740
| ||||| | | ||| ||| |||||| || ||||| ||||||||
Sbjct 61215 ACGATCGACCAGATCCTTGAGCAACCATGG--GTTGACTACCTGGAATTCGCCAGCAAGC 61158
Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800
||||| ||||| || | ||||| ||||| || ||||| ||| ||| | |||
Sbjct 61157 ACACGTCGCGAATAGATATTGCTGGTGTACGGTTCAAAGCACTCGTTGAAGCCCATGATC 61098
Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTC 109860
|||| |||||| || || ||||| ||||| | ||| | | |||||| | ||| | |
Sbjct 61097 TGTGAAGTGGATGCGGTAGGCATAGGAGCAACGAGCAAAGAGTTTCGCACACCATGCTCA 61038
Query 109861 TTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCC 109920
| | | || || ||||||||| || || | | || | || |
Sbjct 61037 GCAATCTTGGCCTTCAATGAGTCCCAATCCCAAAGATCTG---ACGGGGTAACGCC---C 60984
Query 109921 CACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGAC 109980
|||||||| ||||| | |||| | | |||||||| | | ||||||| |
Sbjct 60983 CACATATCGTACTGAAGCTCGCCCTTTGAGACTGGAGAACCTTCATAGGTCTCGTAAGGA 60924
Query 109981 CCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAA 110040
|| || ||||| || | || || || || ||||| || || ||||| ||
Sbjct 60923 CCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGCAGCATGGTAGATGGTCTCGAAG 60864
Query 110041 ATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAAC 110100
|| || |||| |||| ||| | ||||| || | || | | || ||
Sbjct 60863 ATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGAATGGCATACGAAGAGCAAGGAAG 60804
Query 110101 ACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGA 110160
|||| || ||||| |||||| ||||| ||||| | || |||||| | | ||
Sbjct 60803 GCATCAGCAAGACCGCTAACACCAAGACCGATGGGCCTGTGGCGCATGTT-GCTCTTCTT 60745
Query 110161 GCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217
| | ||| || || || |||| ||||||| | || |||||||| || ||
Sbjct 60744 G--GCCTCTGGCACTGGATAGTGGTTGACCTCGATGATCTTGTTCAGATTCTTGGTGACC 60687
Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGT-CTCCTTATTGACATA 110276
|| | ||||| || || | | | || ||| || |||| ||| | ||||||
Sbjct 60686 ACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAAC-TTCTCGTTCTCGAGGTCGACATA 60628
Query 110277 TTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTC 110336
| || ||||||| ||| ||||||||||| || | || || | ||||| ||
Sbjct 60627 GGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGTGTACTC 60568
Query 110337 CAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTT 110396
| || || || ||||||||||| ||||| || || | |||||||| || ||
Sbjct 60567 GATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCTCTT 60508
Query 110397 GGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAG 110456
| |||| |||||||| ||||| ||| | || ||||| |||||||| | | ||
Sbjct 60507 GCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTTCCAG 60448
Query 110457 AATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGT 110515
|||||| | ||| | | || | | | | ||||| || | ||||||| | |||||
Sbjct 60447 AATGGCATACCAGATCTTCTGAG-CACGCACAGTCTCGCGTCCCCGACCTTCTTTCTCGT 60389
Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575
| ||||| | ||||| ||||| | ||||||||||||| |||||| || ||
Sbjct 60388 AGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGACACTCGT 60329
Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAA 110635
||| || | |||| ||| | | || || || | |||||||||||| || || |
Sbjct 60328 TGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGATCGGGGA 60269
Query 110636 TCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695
|||||| || |||| ||||| || ||| | ||||| | || ||||| |||||
Sbjct 60268 TCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTTCTTGCGTA 60209
Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755
| |||| || |||| ||| | ||||||||| |||||||| | || | | ||
Sbjct 60208 GATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCC-- 60151
Query 110756 TACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCA 110809
| |||| || | || | ||||| || |||||| ||| |||| | ||||
Sbjct 60150 -AGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGACACGAAGCA 60092
Query 110810 TAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAA 110869
| ||||| | || | |||| || || || || ||| ||| |||||||||
Sbjct 60091 TGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGGCACGAA 60032
Query 110870 TGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGA 110929
| | ||| | | ||| |||||||| || ||| || || || | | |
Sbjct 60031 TTTTGTGACAGTTGAGACCGATACCACCAGCATTCTTTGAGATCATAGCGCAAATTTTCA 59972
Query 110930 GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACA 110989
||||| | ||||| || ||||| || | || || | || || |||||||||| ||
Sbjct 59971 GTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAGAAGCCA 59912
Query 110990 TCTGAGGACG--AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047
|| || || ||||| || || |||| ||||| |||| || || |||| ||
Sbjct 59911 ACT--GGCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGATGCGTGTGTGAA-GTACT 59855
Query 111048 T-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAA 111106
| | ||||| | ||||||||| |||| |||| | ||| | |||||||| || |
Sbjct 59854 TATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATCGTCTCCGTGAATTCCGA 59795
Query 111107 TGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAA 111166
|| || ||||||| ||| | || || | ||| | ||| ||||| | || | |
Sbjct 59794 CTGCTACACGCATGATCATGTGCTGCGGTCTCTCGGCGACCTTGCCATCGATCCGGAGCA 59735
Query 111167 GGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
|||| |||||| || |||| |||||||||
Sbjct 59734 GGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTAT 59700
>seq991
Length=42594
Score = 100 bits (110), Expect = 3e-16
Identities = 272/409 (67%), Gaps = 13/409 (3%)
Strand=Plus/Minus
Query 11500 TTACGATCGAAACGACCTGGGCGGAGT-AGAGCATCATCAAGA-ATATCGACACGGTTTG 11557
||||||||||| || || || || ||| ||||| | ||||||| || | | | ||||
Sbjct 27167 TTACGATCGAAGCGTCCAGGACG-AGTCAGAGCTTTATCAAGAGATTGTGGGAAG-TTTG 27110
Query 11558 TAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCT 11617
| ||| |||||| | || || | | | ||||| || || | || || |||||||
Sbjct 27109 TCGCGCCAATGATGATAACACCGGACGACTGATCGAATCCATCGAGCTCAGTAAGAAGCT 27050
Query 11618 GGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC 11677
|||||| ||||| || ||| | || ||| ||| | ||||| ||
Sbjct 27049 GGTTGAGGGTCTG------CTTGGCGTAAGCGG-CAT--CACGCTCATTGCGCTTGCCAC 26999
Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737
| | ||||| | ||| |||||||| | ||| |||| || |||||||| ||
Sbjct 26998 CTATCGCGTCCAGCTCGTCGATGAAGATGATGGACGGGCTCTTCGCACGTGCTGCAATGA 26939
Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797
| || ||||| ||||||||||| || || || ||||| | ||| |||| | | |||
Sbjct 26938 AGAGATCACGAACACGCTTCGCGCCCACTCCCACGAATACTTCATCGAATTCGGACCCAG 26879
Query 11798 AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857
| | || ||| ||||| | || ||| || || | |||||||| || || ||||| |
Sbjct 26878 ACATGTAAAAGAATGGAACTTGAGCCTCTCCCGCCACTGCTCGAGCAAGCAGCGTCTTCC 26819
Query 11858 CCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
| || ||||| | || || || ||| | || ||| | |||| ||||
Sbjct 26818 CGGTGCCAGGAGGCCCCGCAAGCAGGACACCCTTGGGAAGCTTGCCACC 26770
>seq1032
Length=45607
Score = 82.4 bits (90), Expect = 9e-11
Identities = 155/225 (69%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573
||||| || || ||||||||||| || ||| || ||||||||||| || | |||
Sbjct 28818 CCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGACCAGGCATGAGACCACGCTTC 28877
Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633
|| ||||| ||||||| ||| ||| || |||||||| || || || |||||
Sbjct 28878 TTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGATACCTTCAACTGCAGCGAAG 28937
Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGCCCAGTT 119689
|| | || ||| || ||||||||| |||||| || ||| ||| |||||||
Sbjct 28938 GCAATCAGTCGCATGGC-GAAGGTCGAGCTCTTGTCGCTGATCCATCGGAGTGCCCAGTC 28996
Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734
||||| | ||||| |||| | | | |||||| | ||| ||
Sbjct 28997 CGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGAACAG 29041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588961076820600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |