Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq721 241 2e-58 seq991 100 3e-16 seq1032 82.4 9e-11 >seq721 Length=104476 Score = 241 bits (266), Expect = 2e-58 Identities = 1096/1715 (64%), Gaps = 47/1715 (3%) Strand=Plus/Minus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGA---TGATACACTTTTG 109565 ||| |||||||||||||| ||||||||| || ||||| | || || | | || | Sbjct 61389 CTGGGACTGATCGATGAAGGCACCACGATCGGCAGCCATCTGGACAATGTTGCGCT---G 61333 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC---CACGAT 109622 ||| |||||||| || |||||||| | ||||| ||| ||| ||||| ||| | Sbjct 61332 GCTGATTTCCCACACGGTCTTGTAGAGGGCCTTGAGATCGTCGCCAATGTTTGGCAC-AC 61274 Query 109623 GTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682 | | ||||||| || ||| | | ||| ||| |||||| | | ||||| ||||| Sbjct 61273 GCT--GAATAGACCCTCCATCAGCAATGATGCGATTCTTCATGTTCTCGGACCAAAGACC 61216 Query 109683 GACCTTTTTGAGATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740 | ||||| | | ||| ||| |||||| || ||||| |||||||| Sbjct 61215 ACGATCGACCAGATCCTTGAGCAACCATGG--GTTGACTACCTGGAATTCGCCAGCAAGC 61158 Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800 ||||| ||||| || | ||||| ||||| || ||||| ||| ||| | ||| Sbjct 61157 ACACGTCGCGAATAGATATTGCTGGTGTACGGTTCAAAGCACTCGTTGAAGCCCATGATC 61098 Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTC 109860 |||| |||||| || || ||||| ||||| | ||| | | |||||| | ||| | | Sbjct 61097 TGTGAAGTGGATGCGGTAGGCATAGGAGCAACGAGCAAAGAGTTTCGCACACCATGCTCA 61038 Query 109861 TTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCC 109920 | | | || || ||||||||| || || | | || | || | Sbjct 61037 GCAATCTTGGCCTTCAATGAGTCCCAATCCCAAAGATCTG---ACGGGGTAACGCC---C 60984 Query 109921 CACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGAC 109980 |||||||| ||||| | |||| | | |||||||| | | ||||||| | Sbjct 60983 CACATATCGTACTGAAGCTCGCCCTTTGAGACTGGAGAACCTTCATAGGTCTCGTAAGGA 60924 Query 109981 CCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAA 110040 || || ||||| || | || || || || ||||| || || ||||| || Sbjct 60923 CCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGCAGCATGGTAGATGGTCTCGAAG 60864 Query 110041 ATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAAC 110100 || || |||| |||| ||| | ||||| || | || | | || || Sbjct 60863 ATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGAATGGCATACGAAGAGCAAGGAAG 60804 Query 110101 ACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGA 110160 |||| || ||||| |||||| ||||| ||||| | || |||||| | | || Sbjct 60803 GCATCAGCAAGACCGCTAACACCAAGACCGATGGGCCTGTGGCGCATGTT-GCTCTTCTT 60745 Query 110161 GCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | | ||| || || || |||| ||||||| | || |||||||| || || Sbjct 60744 G--GCCTCTGGCACTGGATAGTGGTTGACCTCGATGATCTTGTTCAGATTCTTGGTGACC 60687 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGT-CTCCTTATTGACATA 110276 || | ||||| || || | | | || ||| || |||| ||| | |||||| Sbjct 60686 ACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAAC-TTCTCGTTCTCGAGGTCGACATA 60628 Query 110277 TTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTC 110336 | || ||||||| ||| ||||||||||| || | || || | ||||| || Sbjct 60627 GGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGTGTACTC 60568 Query 110337 CAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTT 110396 | || || || ||||||||||| ||||| || || | |||||||| || || Sbjct 60567 GATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCTCTT 60508 Query 110397 GGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAG 110456 | |||| |||||||| ||||| ||| | || ||||| |||||||| | | || Sbjct 60507 GCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTTCCAG 60448 Query 110457 AATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGT 110515 |||||| | ||| | | || | | | | ||||| || | ||||||| | ||||| Sbjct 60447 AATGGCATACCAGATCTTCTGAG-CACGCACAGTCTCGCGTCCCCGACCTTCTTTCTCGT 60389 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575 | ||||| | ||||| ||||| | ||||||||||||| |||||| || || Sbjct 60388 AGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGACACTCGT 60329 Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAA 110635 ||| || | |||| ||| | | || || || | |||||||||||| || || | Sbjct 60328 TGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGATCGGGGA 60269 Query 110636 TCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695 |||||| || |||| ||||| || ||| | ||||| | || ||||| ||||| Sbjct 60268 TCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTTCTTGCGTA 60209 Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755 | |||| || |||| ||| | ||||||||| |||||||| | || | | || Sbjct 60208 GATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCC-- 60151 Query 110756 TACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCA 110809 | |||| || | || | ||||| || |||||| ||| |||| | |||| Sbjct 60150 -AGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGACACGAAGCA 60092 Query 110810 TAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAA 110869 | ||||| | || | |||| || || || || ||| ||| ||||||||| Sbjct 60091 TGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGGCACGAA 60032 Query 110870 TGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGA 110929 | | ||| | | ||| |||||||| || ||| || || || | | | Sbjct 60031 TTTTGTGACAGTTGAGACCGATACCACCAGCATTCTTTGAGATCATAGCGCAAATTTTCA 59972 Query 110930 GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACA 110989 ||||| | ||||| || ||||| || | || || | || || |||||||||| || Sbjct 59971 GTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAGAAGCCA 59912 Query 110990 TCTGAGGACG--AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047 || || || ||||| || || |||| ||||| |||| || || |||| || Sbjct 59911 ACT--GGCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGATGCGTGTGTGAA-GTACT 59855 Query 111048 T-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAA 111106 | | ||||| | ||||||||| |||| |||| | ||| | |||||||| || | Sbjct 59854 TATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATCGTCTCCGTGAATTCCGA 59795 Query 111107 TGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAA 111166 || || ||||||| ||| | || || | ||| | ||| ||||| | || | | Sbjct 59794 CTGCTACACGCATGATCATGTGCTGCGGTCTCTCGGCGACCTTGCCATCGATCCGGAGCA 59735 Query 111167 GGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 |||| |||||| || |||| ||||||||| Sbjct 59734 GGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTAT 59700 >seq991 Length=42594 Score = 100 bits (110), Expect = 3e-16 Identities = 272/409 (67%), Gaps = 13/409 (3%) Strand=Plus/Minus Query 11500 TTACGATCGAAACGACCTGGGCGGAGT-AGAGCATCATCAAGA-ATATCGACACGGTTTG 11557 ||||||||||| || || || || ||| ||||| | ||||||| || | | | |||| Sbjct 27167 TTACGATCGAAGCGTCCAGGACG-AGTCAGAGCTTTATCAAGAGATTGTGGGAAG-TTTG 27110 Query 11558 TAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCT 11617 | ||| |||||| | || || | | | ||||| || || | || || ||||||| Sbjct 27109 TCGCGCCAATGATGATAACACCGGACGACTGATCGAATCCATCGAGCTCAGTAAGAAGCT 27050 Query 11618 GGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC 11677 |||||| ||||| || ||| | || ||| ||| | ||||| || Sbjct 27049 GGTTGAGGGTCTG------CTTGGCGTAAGCGG-CAT--CACGCTCATTGCGCTTGCCAC 26999 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737 | | ||||| | ||| |||||||| | ||| |||| || |||||||| || Sbjct 26998 CTATCGCGTCCAGCTCGTCGATGAAGATGATGGACGGGCTCTTCGCACGTGCTGCAATGA 26939 Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797 | || ||||| ||||||||||| || || || ||||| | ||| |||| | | ||| Sbjct 26938 AGAGATCACGAACACGCTTCGCGCCCACTCCCACGAATACTTCATCGAATTCGGACCCAG 26879 Query 11798 AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857 | | || ||| ||||| | || ||| || || | |||||||| || || ||||| | Sbjct 26878 ACATGTAAAAGAATGGAACTTGAGCCTCTCCCGCCACTGCTCGAGCAAGCAGCGTCTTCC 26819 Query 11858 CCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 | || ||||| | || || || ||| | || ||| | |||| |||| Sbjct 26818 CGGTGCCAGGAGGCCCCGCAAGCAGGACACCCTTGGGAAGCTTGCCACC 26770 >seq1032 Length=45607 Score = 82.4 bits (90), Expect = 9e-11 Identities = 155/225 (69%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 ||||| || || ||||||||||| || ||| || ||||||||||| || | ||| Sbjct 28818 CCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGACCAGGCATGAGACCACGCTTC 28877 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| ||| ||| || |||||||| || || || ||||| Sbjct 28878 TTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGATACCTTCAACTGCAGCGAAG 28937 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 || | || ||| || ||||||||| |||||| || ||| ||| ||||||| Sbjct 28938 GCAATCAGTCGCATGGC-GAAGGTCGAGCTCTTGTCGCTGATCCATCGGAGTGCCCAGTC 28996 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 ||||| | ||||| |||| | | | |||||| | ||| || Sbjct 28997 CGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGAACAG 29041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961076820600