Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq721 217 2e-51
seq537 91.5 2e-13
>seq721
Length=104476
Score = 217 bits (240), Expect = 2e-51
Identities = 619/941 (66%), Gaps = 19/941 (2%)
Strand=Plus/Minus
Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
|||||| |||| || || | ||||| | |||||| || || ||||| | ||
Sbjct 60633 GACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGT 60574
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | || ||||| ||||||||||| ||||| ||||| || | |||||| |||||
Sbjct 60573 GTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTT 60514
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
||||| |||| |||||||||||||| ||| | || || ||||||||||| |
Sbjct 60513 GCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGC 60454
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCG 106685
| ||||| || | ||| | | || | || | ||| | || |||| || ||
Sbjct 60453 TTCCAGAATGGCATACCAGATCTTCTG-AGCACGCACAGTCTCGCGTCCCCGACCTTCTT 60395
Query 106686 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 106745
|||||| ||||| || | || || || ||||| | | || | ||||| ||
Sbjct 60394 TCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGAC 60335
Query 106746 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGT 106805
|| || || || | || | ||||| | || || || ||||||||||| || |
Sbjct 60334 ACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGAT 60275
Query 106806 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 106865
| || |||||||||| | || || || | | ||| | ||||| | || |||||
Sbjct 60274 CGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTTCT 60215
Query 106866 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 106925
|||| || | ||| |||| ||| |||||||||||||| ||||| | || | ||
Sbjct 60214 TGCGTAGATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAG 60155
Query 106926 ATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 106979
|| ||||| ||| |||||| ||||| || |||||| ||| | || |
Sbjct 60154 CGCC---AGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGACAC 60098
Query 106980 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 107039
||||||| ||||| | || | ||| || || || || ||| ||| |||
Sbjct 60097 GAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGG 60038
Query 107040 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACA 107097
| | | | || || | || ||||| ||||| ||||||||| | ||||| |
Sbjct 60037 CACGAATTTTGTGACAGTTGAGACCGATACCACCAGCATTCTTTGAGATCATAGCGCAAA 59978
Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157
| | || || | || || || | || ||| || || || |||| ||||||||
Sbjct 59977 TT--TTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGATGAGGAAGCA 59920
Query 107158 ACTGGACATCT-GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216
| | || || || || | || |||||||| |||| || ||||||| |||||| |||
Sbjct 59919 AGAAGCCAACTGGCCGT-TCGGCGTACCAGCGCTGAACAGTGTTGGTGATGCGTGTGTGA 59861
Query 107217 ACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275
| ||| | | ||||| | || ||||||||| | | | | || || || || |||||
Sbjct 59860 A-GTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATCGTCTCCGTGA 59802
Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGC 107335
|| |||| || |||||||| | ||||| || ||| | || || ||||||||| |
Sbjct 59801 ATTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTCGGCGACCTTGCCATCGATC 59742
Query 107336 CGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|| | || || ||| || ||||||| ||||||||
Sbjct 59741 CGGAGCAGGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTA 59701
>seq537
Length=37262
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422
||||| | ||||||||||||||| ||||||| ||||| || |||| ||| || |
Sbjct 22656 TTTCCAATGGCATCAATCTCATCGATGAAGATGATACAAGGCGTGTTTTTGCGAGCATTG 22597
Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482
|||||||||| || || | | | || |||||||||||||| |||||||| | | |
Sbjct 22596 GCAAAGAGATCTCGTACACGACTTGGACCAACACCAACAAACATTTCCACAAATTCAGAG 22537
Query 9483 GCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 9542
| ||| || ||| || ||| | || || || | || |||||| || |||
Sbjct 22536 CCAGAAACGGAGAAGAAAGGCACACCACTCTCGCCTGCTGTAGCCTTGGCGAGGAGCGTC 22477
Query 9543 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
||||| || || || || | | || ||||| || || ||||| |||||
Sbjct 22476 TTACCAGTTCCGGGAGGTCCTGACAAGATAGCACCACGAGGGATCTTTGCGCC 22424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589965851361480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |