Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq721 217 2e-51 seq537 91.5 2e-13 >seq721 Length=104476 Score = 217 bits (240), Expect = 2e-51 Identities = 619/941 (66%), Gaps = 19/941 (2%) Strand=Plus/Minus Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 |||||| |||| || || | ||||| | |||||| || || ||||| | || Sbjct 60633 GACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGT 60574 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | || ||||| ||||||||||| ||||| ||||| || | |||||| ||||| Sbjct 60573 GTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTT 60514 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 ||||| |||| |||||||||||||| ||| | || || ||||||||||| | Sbjct 60513 GCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGC 60454 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCG 106685 | ||||| || | ||| | | || | || | ||| | || |||| || || Sbjct 60453 TTCCAGAATGGCATACCAGATCTTCTG-AGCACGCACAGTCTCGCGTCCCCGACCTTCTT 60395 Query 106686 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 106745 |||||| ||||| || | || || || ||||| | | || | ||||| || Sbjct 60394 TCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGAC 60335 Query 106746 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGT 106805 || || || || | || | ||||| | || || || ||||||||||| || | Sbjct 60334 ACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGAT 60275 Query 106806 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 106865 | || |||||||||| | || || || | | ||| | ||||| | || ||||| Sbjct 60274 CGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAACTTCTTCCTTTCCGTGGTTCT 60215 Query 106866 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 106925 |||| || | ||| |||| ||| |||||||||||||| ||||| | || | || Sbjct 60214 TGCGTAGATCCATGAAAGAAATGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAG 60155 Query 106926 ATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 106979 || ||||| ||| |||||| ||||| || |||||| ||| | || | Sbjct 60154 CGCC---AGGACGCTTGTTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGACAC 60098 Query 106980 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 107039 ||||||| ||||| | || | ||| || || || || ||| ||| ||| Sbjct 60097 GAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGG 60038 Query 107040 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACA 107097 | | | | || || | || ||||| ||||| ||||||||| | ||||| | Sbjct 60037 CACGAATTTTGTGACAGTTGAGACCGATACCACCAGCATTCTTTGAGATCATAGCGCAAA 59978 Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157 | | || || | || || || | || ||| || || || |||| |||||||| Sbjct 59977 TT--TTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGATGAGGAAGCA 59920 Query 107158 ACTGGACATCT-GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 | | || || || || | || |||||||| |||| || ||||||| |||||| ||| Sbjct 59919 AGAAGCCAACTGGCCGT-TCGGCGTACCAGCGCTGAACAGTGTTGGTGATGCGTGTGTGA 59861 Query 107217 ACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 | ||| | | ||||| | || ||||||||| | | | | || || || || ||||| Sbjct 59860 A-GTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCGATATCGTCTCCGTGA 59802 Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGC 107335 || |||| || |||||||| | ||||| || ||| | || || ||||||||| | Sbjct 59801 ATTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTCGGCGACCTTGCCATCGATC 59742 Query 107336 CGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 || | || || ||| || ||||||| |||||||| Sbjct 59741 CGGAGCAGGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTA 59701 >seq537 Length=37262 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 ||||| | ||||||||||||||| ||||||| ||||| || |||| ||| || | Sbjct 22656 TTTCCAATGGCATCAATCTCATCGATGAAGATGATACAAGGCGTGTTTTTGCGAGCATTG 22597 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 |||||||||| || || | | | || |||||||||||||| |||||||| | | | Sbjct 22596 GCAAAGAGATCTCGTACACGACTTGGACCAACACCAACAAACATTTCCACAAATTCAGAG 22537 Query 9483 GCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 9542 | ||| || ||| || ||| | || || || | || |||||| || ||| Sbjct 22536 CCAGAAACGGAGAAGAAAGGCACACCACTCTCGCCTGCTGTAGCCTTGGCGAGGAGCGTC 22477 Query 9543 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||| || || || || | | || ||||| || || ||||| ||||| Sbjct 22476 TTACCAGTTCCGGGAGGTCCTGACAAGATAGCACCACGAGGGATCTTTGCGCC 22424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589965851361480