Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq644 95.1 1e-14
>seq644
Length=73069
Score = 95.1 bits (104), Expect = 1e-14
Identities = 175/254 (69%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATA-TGT 159606
||||| | || |||||||| || || || || ||| | | ||| | ||| |||
Sbjct 12049 TTATGGTGACCTATCCATCCACGTTCGGAGTGTTCGAACCCGAGGTCA-AGAGAGCGTGT 12107
Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666
||||||| || || | |||||||| || || | || || || || | || |||||
Sbjct 12108 GAGATTGTGCACAAGCACGGTGGTCAAGTTTACATGGACGGCGCCAACATGAACGCACAA 12167
Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726
| ||||| || | || |||||| ||||| || ||||| ||| | || |||
Sbjct 12168 ATTGGTCTTTGCTCGCCGGGCGAGATTGGTGCTGATGTGTGCCATCTCAACCTCCACAAG 12227
Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786
|||||||||||||| || ||||| || |||||||| || || || || || || || |
Sbjct 12228 ACATTCTGTATTCCTCACGGAGGAGGTGGTCCTGGAGTGGGACCCATCGGCGTTGCTGAG 12287
Query 159787 CATCTCACACCATT 159800
|| ||| | |||||
Sbjct 12288 CACCTCGCTCCATT 12301
Score = 82.4 bits (90), Expect = 9e-11
Identities = 121/170 (71%), Gaps = 1/170 (1%)
Strand=Plus/Plus
Query 157935 TCTTG-AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGG 157993
||||| ||||||| |||||||| ||||| ||||| || ||||||| |||||
Sbjct 10375 TCTTGGAGAATCCAGCCTGGTACACCAGCTACACGCCCTACCAGCCTGAGATCAGTCAGG 10434
Query 157994 GAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGA 158053
|| ||||||| | | | || | ||| || | | || || ||||||||||| | |
Sbjct 10435 GACGATTGGAGTCGCTGCTGAACTTCCAGACCATGGTGACGGATCTCACAGGACTCGCAA 10494
Query 158054 TAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
| || || || || || | |||||||| ||||| |||||||| || |||
Sbjct 10495 TCGCCAATGCGTCCCTCCTCGATGAAGCTACTGCTGCAGCAGAGGCTATG 10544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588036300252720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |