Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 134 3e-26
seq1019 89.7 1e-12
>seq1917
Length=9250
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || | ||| |||||| ||| || ||||| ||||| || | | ||| | |||||
Sbjct 8962 CAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATC 9021
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| | |||||| |||||||| || || || || ||||| || || || || || |||||
Sbjct 9022 TTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTC 9081
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|||||| || ||| || || || || ||||| || ||||||||| || |||| |||
Sbjct 9082 TTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGT 9141
Query 195108 CTTTCCTGTCAAAGTTTTTACGAA 195131
||||||||| | || || |||||
Sbjct 9142 CTTTCCTGTGAGTGTCTTGACGAA 9165
>seq1019
Length=44428
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/184 (70%), Gaps = 15/184 (8%)
Strand=Plus/Minus
Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994
||||| ||||||||||| || ||||| ||||| || | || || | || || ||||||
Sbjct 44428 AGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGC 44369
Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054
||||| || || ||||| | || || ||||| ||||||||||| || ||
Sbjct 44368 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTC-------CGA--- 44319
Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114
||||||||| ||||| || || ||| || || || ||||| | ||||| ||
Sbjct 44318 -----CTTGACGTTGTCAATCGTATCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCG 44264
Query 195115 GTCA 195118
||||
Sbjct 44263 GTCA 44260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109452785722709
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |