Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 219 8e-52
>seq1032
Length=45607
Score = 219 bits (242), Expect = 8e-52
Identities = 566/854 (66%), Gaps = 15/854 (2%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAG---TTTGTCTTCCCCTCCAACGAGATGTTC 47896
|||||||| || || | ||||| |||||| || ||||| || ||| |||||| |||
Sbjct 28506 TGGTAGTCTCCAACGCGCTTCTCGAAGAAGAAGTTGGTCTTGCCACCCAGCGAGATATTC 28565
Query 47897 TCCATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCA 47954
||||||||| ||| ||||||| | ||| || | | | || ||| | | |
Sbjct 28566 TCCATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGGTT--GCCGAGCGCCAGGA 28623
Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014
|||| | || || || | || ||||| | ||||||| | ||||||||| | ||
Sbjct 28624 GCAGACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGGA 28683
Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| | ||| | || | ||| || ||||||| ||| ||| ||||| || | | |
Sbjct 28684 GTGCGCAGGGGAGGGCGTCTGTCAGGAACTCCTGCTCGATCGCAACGGCCTCGACGATGA 28743
Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134
| || ||| | || |||||| ||||| |||||| | | |||| ||| |
Sbjct 28744 TGCTCTGTACGACAGCCTTTGAGGGCTTGTTCTTCAGGTGAGAGA---ACAGCAGGCACG 28800
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
| ||||| |||||| ||||||||| || ||||||| |||||||||| ||||||||
Sbjct 28801 CGAAGTCGGTGTGCATGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGACCAG 28860
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||||| || | || || |||||||| || | || || || || ||||||||||| |
Sbjct 28861 GCATGAGACCACGCTTCTTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGATAC 28920
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
| || ||||| ||||| || | || | | |||| | | | ||||||| |||||
Sbjct 28921 CTTCAACTGCAGCGAAGGCAATCAGTCGCATGGCGAAGGTCGAGCTCTTGTCGCTGATCC 28980
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374
| || |||||||| ||||| | |||||| || || | || ||||| ||| |
Sbjct 28981 ATCGGAGTGCCCAGTCCGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGAACA 29040
Query 48375 GCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
| | | | | || | ||| || || || || || | ||| ||||
Sbjct 29041 GGTATGTTC-GTTGTTTGGGCTCGCTAATGTATGTGTCGATGAGGAGGGAGTATGTCTCC 29099
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| || |||||| | || || || |
Sbjct 29100 GAGTGGATGTTCTCCATCATGATCTGGAATCCATAGAAGCATCGTGCTTCGGGTACTGTC 29159
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
||||| | | ||| | |||| ||| ||||| ||||| || |||||||| || || |||
Sbjct 29160 ACTTCGGCGCTGAAGCGTTCCACCAGGTTCTCGTTGACGATGCCATCTGATGCGGCGAAG 29219
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA-GAGC--ATTCCAGCCC 48610
|| ||||| |||||| | ||| ||||||| || ||||| | || |||||| |
Sbjct 29220 AATGCAAGAACATGTGAGATGAAGAAACGCTCGTCGTCGGTGAGGCGCTTGTTCCAGTCA 29279
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
|| | || || || || | || || |||||||||| || || || || |||
Sbjct 29280 TGCAGATCCTTTGATAGATCAATCTCCTCGGCAGTCCAGAATGATGCTTCGGCCTTCTTG 29339
Query 48671 TACATGCCCCATAT 48684
|||||| ||||||
Sbjct 29340 TACATGTTCCATAT 29353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931509197287680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |