Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq721 277 3e-69 seq1032 214 3e-50 >seq721 Length=104476 Score = 277 bits (306), Expect = 3e-69 Identities = 982/1510 (65%), Gaps = 47/1510 (3%) Strand=Plus/Minus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || || || | |||||| ||||| | | |||| | | ||||| || || ||| Sbjct 60944 CCTTCATAGGTCTCGTAAGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGCA 60885 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGAA 221484 || |||||||||||||| |||||| |||| || ||| | |||||||| || ||| Sbjct 60884 GCATGGTAGATGGTCTCGAAGATCTGGATGTTCAG-CTCACGAGCCTCGGGCGACTCGAA 60826 Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544 |||||||| || | ||| | || || || || || || | |||||||||||| Sbjct 60825 TGGCATACGAAGAGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGATGGGCCT 60766 Query 221545 GTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604 ||| | | ||||| || |||||||| ||||| |||||| ||||| | || Sbjct 60765 GTGGCGCATGTTGCTCTTCTTGGCCTCTGGCACTGGATAGTGGTTGACCTCGATGATCTT 60706 Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664 ||| || ||| |||| || | ||| ||||| |||||||||| || | || Sbjct 60705 GTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGG------AAGTCAAA 60652 Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724 || || ||| || || ||| | | || |||| || || || || Sbjct 60651 CTTCTCGTTCTCGAGG------TCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCA 60598 Query 221725 CACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCAC 221782 ||||| || || || | || || |||| ||||||||||| || | |||| || | Sbjct 60597 TACGGCGACTTCATCA--GGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTC 60540 Query 221783 TTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATA 221842 ||||| || || || | || || || |||||| |||||||| ||||||||||| || Sbjct 60539 TTGATCGTTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATG 60480 Query 221843 AAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCT 221901 || || |||||||||||| ||| || ||||||| | ||||| | |||| || | Sbjct 60479 AAAGGTCCGCCAGTCTCCGTCTGGGCTTCCAGAATGGCATACCAGA-TCTTCTGAGCACG 60421 Query 221902 CACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACT 221960 ||| || ||| | | | ||| ||||| || || | || || ||| || || | Sbjct 60420 CACAGT-CTCGCGTCCCCGACCT---TCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATT 60365 Query 221961 TTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCT 222020 ||||||||| | || | || || |||||| | ||| |||||||| |||| | Sbjct 60364 CGTCACCGTACACATCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGG 60305 Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080 ||| | || || | || |||||| || || ||||||||||| || || || || | Sbjct 60304 CGTTCTGTTCCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGC 60245 Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG---T 222137 | || || ||| |||| ||| || | ||||||| || | ||||| | Sbjct 60244 GAGCGCGAACTTCTTCCTTTCCGTGGTTCTTGCGTAGATCCATGAA---AGAAATGACAT 60188 Query 222138 CAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGAT 222197 | |||||||| ||||| ||||| | ||| | |||||| || |||||||||||||| |||| Sbjct 60187 CGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCACCTTGAT 60128 Query 222198 CCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 | | ||| | | | |||| ||| ||||| | || | ||| ||||||||| Sbjct 60127 CGA-CATAACGAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTG 60069 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGAT 222315 ||||| ||||| |||||| | ||| ||| | | || || ||| | ||||| Sbjct 60068 CCGTTCGTGCCAGCAATGTAGGATCCGGTGGCAC-GAATTTTGTGACAGTTGAGACCGAT 60010 Query 222316 ACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCAT 222375 |||||| || | || |||||||| ||||| | || || || || || ||||| || Sbjct 60009 ACCACCAGCATTCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAAT 59950 Query 222376 AGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGC 222435 ||| || || | || | || || ||||| | || ||| || | | || || Sbjct 59949 GCTGTCGTCTTTCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTACCAGC 59890 Query 222436 GTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495 | | ||||| || || |||||||| ||||| | ||||| | ||| ||||| Sbjct 59889 GCTGAACAGTGTTGGTGATGCGTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTC 59830 Query 222496 TACGACTCTGGCGATGTTGTCCCCGTGAA-TCTGCATGGCGCATCTCATGTACATGTACT 222554 | | | |||| | ||| ||||||| || | || || | |||| ||||| || Sbjct 59829 GATGGCGGCCTCGATATCGTCTCCGTGAATTCCGACTGCTACA-CGCATGATCATGTGCT 59771 Query 222555 GGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTC 222610 | || ||||| | ||| || | || | | ||||||||| || || || || Sbjct 59770 GCGGTCTCTCGGC--GACCTTGCCATCGATCCG--GAGCAGGTATGAGCGCTCTAGCGTT 59715 Query 222611 TTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCC 222670 ||||| |||||||| | | || || |||||| ||| || | ||| | || || | | Sbjct 59714 TTGAAGCCAAAGTATTGGTAGTTGAAATCTCTGTCGTAGACAATGGCAGAGTTGAG-TTC 59656 Query 222671 GACT-TGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTT 222729 | || ||||| | || | | | | || || | | ||||| || || Sbjct 59655 GTCTGCGTGCTCCATCACCACTTTGTATGTGTAATCCGAGATCATGGGAGACGGCTTGTT 59596 Query 222730 GGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAACGTGTCGGGAGT 222789 | | | || ||||||| || ||||| | | | | || |||||||| | || Sbjct 59595 GTTCTTCGGATTAACGTAGTTGTACAAATCTGATACGACAGCAGAGAACTGCTTCTTTGT 59536 Query 222790 CTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCAC 222849 ||||||||| || ||||| ||||| || |||| || | ||| | ||||| ||||| Sbjct 59535 CTGCTTGTGAAGGTTCGAGACGGCAATGCGAGCGGCGAGGATGGCGTAGTCTGGGTGGGT 59476 Query 222850 GGTGGTCATG 222859 |||||||||| Sbjct 59475 GGTGGTCATG 59466 >seq1032 Length=45607 Score = 214 bits (236), Expect = 3e-50 Identities = 575/871 (66%), Gaps = 47/871 (5%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||||||||| || ||| |||||| ||||| ||||||||||| Sbjct 29353 ATATGGAACATGTACAAGAAGGCCGAAGCATCATTCTGGACTGCCGAGGAGATTGATCTA 29294 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-A 25595 | ||||| || | | |||| || | || ||||| ||| ||| ||| | | Sbjct 29293 TCAAAGGATCTGCATGACTGGAACAAGCGCCTCACCGACGACGAGCGTTTCTTCATCTCA 29234 Query 25596 CGTGTTG--GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 | |||| |||||||| || || || ||||| || || |||||||| ||| || | Sbjct 29233 CATGTTCTTGCATTCTTCGCCGCATCAGATGGCATCGTCAACGAGAACCTGGTGGAACGC 29174 Query 25654 TTCACCAGGGAAGTG-CAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | |||||| |||||| | || | | || ||||| || |||||||| || Sbjct 29173 TTCAGCGCCGAAGTGACAGTACCCGAAGCACGA-TGCTTCTATGGATTCCAGATCATGAT 29115 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || || || || || || ||||||| || Sbjct 29114 GGAGAACATCCACTCGGAGACATACTCC---CTCCTCATCGACACATACATTAGCGA--- 29061 Query 25770 CGCCGAGAGA--GATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 ||| | | | || | ||||| |||||||| | || || ||||| || | Sbjct 29060 -GCCCAAACAACGAACATACCTGTTCAACGCCATCGACAATATCCCTTGCATCCGCAGAA 29002 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 ||||| ||||| | ||||||| | | ||||| | || || | | ||| ||| Sbjct 29001 AGGCGGACTGGGCACTCCGATGGATCAGCGACAAGAGCTCGACCTTCGCCATGCGACTGA 28942 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| ||||| || || || ||||| ||| ||| || ||||| |||||||||||| Sbjct 28941 TTGCCTTCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCCTTTGCATCCATCTTCTGGC 28882 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 | ||| || || |||||| || || || ||||||||||||||| | |||| Sbjct 28881 TGAAGAAGCGTGGTCTCATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACG 28822 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT 26065 | || | |||| || || || |||||||| | | | ||| || |||| || Sbjct 28821 AAGGCATGCACACCGACTTCGCGTGCCTGCTGTTCTC---TCACCTGAAGAACAAGCC-- 28767 Query 26066 CTCAAGAGACCGTC-TAC--AGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122 ||||| || | ||| ||| || |||||| ||||| || | ||||||| ||||||| | Sbjct 28766 CTCAA-AGGCTGTCGTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCC 28708 Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACA 26182 | ||||||||| | |||||| |||| |||| Sbjct 28707 TGACAGACGCCCTCCCCTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGTACA 28648 Query 26183 TTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACA 26236 |||| | ||||||||||| |||||| |||| |||| ||||| |||||| Sbjct 28647 TTGAATTTGTGGCCGACCGTCTGCT------CCTGGCGCTCGGCAACCAGAAGTTCTACA 28594 Query 26237 GTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA--- 26291 |||| | |||||||||||||| ||||| || || ||| ||| || |||||||| Sbjct 28593 --ACGCCACCAACCCGTTCGACTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTT 28536 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 |||||| || ||| | || || ||||| ||| Sbjct 28535 CTTCTTCGAGAAGCGCGTTGGAGACTACCAA 28505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928821265394880