Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq644 82.4 9e-11
>seq644
Length=73069
Score = 82.4 bits (90), Expect = 9e-11
Identities = 121/170 (71%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| ||||||||||| ||||| |||||||| | || || || || || |||| | |||
Sbjct 10544 CATAGCCTCTGCTGCAGCAGTAGCTTCATCGAGGAGGGACGCATTGGCGATTGCGAGTCC 10485
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||| || || || | | || ||| | || | | | ||||||| ||||||| ||
Sbjct 10484 TGTGAGATCCGTCACCATGGTCTGGAAGTTCAGCAGCGACTCCAATCGTCCCTGACTGAT 10425
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCT-CAAGA 140027
||||| || ||||| ||||| |||||||| ||||||| |||||
Sbjct 10424 CTCAGGCTGGTAGGGCGTGTAGCTGGTGTACCAGGCTGGATTCTCCAAGA 10375
Score = 82.4 bits (90), Expect = 9e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221
||||| | ||| || | || || || || || || || |||||||| || ||||| ||
Sbjct 12301 AATGGAGCGAGGTGCTCAGCAACGCCGATGGGTCCCACTCCAGGACCACCTCCTCCGTGA 12242
Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269
||||||||||||||||| || | || ||||| || ||||| ||||||
Sbjct 12241 GGAATACAGAATGTCTTGTGGAGGTTGAGATGGCACACATCAGCACCA 12194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578983729628040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |