Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq721 190 2e-43 >seq721 Length=104476 Score = 190 bits (210), Expect = 2e-43 Identities = 613/941 (65%), Gaps = 19/941 (2%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| ||||||| || ||| || || | ||| ||||||||| || Sbjct 59701 TACTTTGGCTTCAAAACGCTAGAGCGCTCATACCTGCTCCGGATCGATGGCAAGGTCGCC 59760 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || | || ||| ||||| ||||||| || ||| |||| || ||||| || || || || Sbjct 59761 GAGAGACCGCAGCACATGATCATGCGTGTAGCAGTCGGAATTCACGGAGACGATATCGAG 59820 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 | | | | ||||||||| || | ||||| | | ||| |||| |||||| ||||||| Sbjct 59821 GCCGCCATCGAGACATACAACTACATGTCGAATAAGTAC-TTCACACACGCATCACCAAC 59879 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGC-AGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 || |||| |||||||| || | || || || || | ||||||||| |||| || | Sbjct 59880 ACTGTTCAGCGCTGGTACGCCGA-ACGGCCAGTTGGCTTCTTGCTTCCTCATCGACATGA 59938 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAA 75441 | || ||| || | || || || | || || | | | ||||| | |||||||| Sbjct 59939 AAGACGACAGCATTGAGGGAATTTACGATACACTGAA--AATTTGCGCTATGATCTCAAA 59996 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 75501 | ||||| ||||| || | || || | | | |||| ||| ||| Sbjct 59997 GAATGCTGGTGGTATCGGTCTCAACTGTCACAAAATTCGTGCCACCGGATCCTACATTGC 60056 Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 || || || || ||| | || | ||||| |||||||| || | ||| |||||| Sbjct 60057 TGGCACGAACGGCACATCCAACGGCCTGATTCCCATGCTTCGTGTCTACAACAACACAGC 60116 Query 75562 GCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGA 75615 || ||||| |||||| || ||||| || | | || | || | || Sbjct 60117 TCGTTATGTCGATCAAGGTGGCAACAAGCGTCCT---GGCGCTTTTGCCATTTATCTCGA 60173 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 |||||||| |||||| |||| ||| | || |||| ||||| || | ||||| Sbjct 60174 GCCATGGCACGCCGATGTCATTTCTTTCATGGATCTACGCAAGAACCACGGAAAGGAAGA 60233 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | ||| | | || || || | |||||||||| || || || ||||||||||| || Sbjct 60234 AGTTCGCGCTCGCGACCTGTTCTTCGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGT 60293 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGC 75795 || || | ||||| | || | || || || || || ||||| | || | Sbjct 60294 GGAACAGAACGCCGAATGGACCCTGATGTGCCCCAACGAGTGTCCCGGTCTTGCTGATGT 60353 Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC 75855 | ||||| || || || | || ||||| || || | || ||| | | | Sbjct 60354 GTACGGTGACGAATTCGAGGAGCTTTACACTCGCTACGAGAAAGAAGGTCGGGGACGCGA 60413 Query 75856 GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 |||||| | || | || | | ||| | || ||||| || | |||||||||||||| Sbjct 60414 GACTGTGCGTGCT-CAGAAGATCTGGTATGCCATTCTGGAAGCCCAGACGGAGACTGGCG 60472 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 ||| | || || |||||||||||| ||| ||||| ||||| |||||| | |||| Sbjct 60473 GACCTTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTCGGAA 60532 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||||||||||| || | ||||| || || | |||||||| | ||||| | Sbjct 60533 CGATCAAGAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAAGTCG 60592 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 | || |||||| | ||||| | || || |||| |||||| Sbjct 60593 CCGTATGCAATCTTGCATCTCTTGCTCTGCCAACCTATGTC 60633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596554484417760