Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1612 161 1e-34
seq1917 122 1e-22
seq721 113 6e-20
seq537 100 4e-16
seq465 96.9 5e-15
>seq1612
Length=7758
Score = 161 bits (178), Expect = 1e-34
Identities = 395/595 (66%), Gaps = 9/595 (2%)
Strand=Plus/Plus
Query 196056 CTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTA 196115
|| |||| || || || ||| | ||||| || || | ||||| || || ||||| ||
Sbjct 127 CTCGGGCCCTCCGACGTCTTCGTACTGCTTGCGAGAGAGCCAAGCGCACGCTCTCCTCGT 186
Query 196116 CGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTA 196175
| ||||| || | ||||||||||| ||| || || ||||||||||| || | |
Sbjct 187 CTGCTCAGACCTCCATCGAGATTGATTCACTGTACGAGGGCATTGACTTCTACACTTCGA 246
Query 196176 TTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTG 196235
| || ||||| ||||| || ||| | | ||| | || | |||||| || |
Sbjct 247 TCACTCGTGCCCGTTTCGAGGAGCTTTGCCAGGATCTCTTCCGCTCTACTATGGAGCCAG 306
Query 196236 TTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTG 196295
| || | || || || || ||||| || |||||| || | || ||||| || |
Sbjct 307 TCGAGCGCACTCTCCGCGATGCGAAGATCGACAAGTCTTCTGTGCACGAGATTGTGCTCG 366
Query 196296 TGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATA 196355
| || || || || ||||| || ||||| || ||||| | || ||| ||||| |
Sbjct 367 TTGGTGGGTCCACTCGTATCCCCAAGATCCAGAAGATGGTCTCCGACTTTTTCAACGGCA 426
Query 196356 AAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGG 196415
| || |||| | |||||||| || || || || || || ||||| ||||| || |
Sbjct 427 AGGAGCCAAACCGCTCCATCAACCCAGACGAGGCCGTCGCCTACGGTGCCGCCGTCCAAG 486
Query 196416 CTGCTATTCTCTCAGGTGTTGACAATAATAAC--GTC---CAA-GATCTTCTGCTACTTG 196469
| || || || || |||| ||| | || | ||| ||| || | || || || |
Sbjct 487 CCGCCATCCTGTCCGGTG---ACACTTCTAGCAAGTCTACCAACGAGATCCTCCTGCTCG 543
Query 196470 ATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTG 196529
| || || || | ||||| || | ||||| || || || || ||||| | ||
Sbjct 544 ACGTCGCCCCGCTGTCCCTTGGCATCGAAACTGCCGGCGGAGTCATGACCCCTCTCATCA 603
Query 196530 ATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATC 196589
| | ||||| || || || ||||||||| | ||||| || || | |||| || |
Sbjct 604 AACGCAACACCACCATCCCAACTAAGAAGTCTGAGGTCTTCTCCACCTTCGCCGACAACC 663
Query 196590 AACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAA 196644
|||| ||||||| || || ||||| ||||||||||| || || | || |||||
Sbjct 664 AACCTGGTGTTCTCATCCAGGTATACGAAGGAGAACGATCTCGGACCAAAGATAA 718
Score = 111 bits (122), Expect = 2e-19
Identities = 178/256 (70%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 196652 CTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAAT 196711
|| |||| || || | || || || ||| |||| || | ||||| ||||||||| |
Sbjct 785 CTCGGAAAATTTGAGCTCACTGGTATCCCACCTGCGCCTCGCGGTGTCCCACAGATTGAG 844
Query 196712 GTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCT 196771
|| ||||| || |||||||| || || | ||||| | ||| || |||| |
Sbjct 845 GTCACTTTCGACATTGACGCAAACGGTATCATGAACGTTTCCGCTCTCGAGAAGGGCACC 904
Query 196772 GGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831
||||| | | ||||| ||||||||||| ||||| || || | || |||||||| |||
Sbjct 905 GGCAAGACCAACAAGATCGTGATTACCAACGACAAAGGCCGCTTGTCCAAGGAGGAGATT 964
Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAG 196891
|| || ||| | || || || ||||||| ||| ||||| |||| | | | ||| | |
Sbjct 965 GAGCGCATGTTGGCTGAAGCCGAGAAGTACAAGGACGAAGATGAGGCAGAAGCGAACCGG 1024
Query 196892 ATGAAAGCTATAAATG 196907
|| |||| | ||||
Sbjct 1025 ATTCAAGCGAAGAATG 1040
>seq1917
Length=9250
Score = 122 bits (134), Expect = 1e-22
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930
|| || || || || || ||||| || || || || || || || || |||||||| |||
Sbjct 9165 TTCGTCAAGACACTCACAGGAAAGACGATTACGCTAGAAGTGGAATCCTCAGACACGATC 9106
Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990
|| || | || |||||||||||| ||||| || || ||||| || ||||| || ||
Sbjct 9105 GACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTG 9046
Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050
||||| || || || ||| | |||||||| ||||| | | || |||||| |||| |||
Sbjct 9045 ATTTTCGCAGGCAAGCAGTTGGAAGATGGTCGTACTTTGTCAGACTACAACATTCAGAAG 8986
Query 172051 GAGTCTACTCTACAC 172065
||| ||||| |||
Sbjct 8985 GAGAGCACTCTGCAC 8971
>seq721
Length=104476
Score = 113 bits (124), Expect = 6e-20
Identities = 580/912 (64%), Gaps = 25/912 (3%)
Strand=Plus/Plus
Query 77927 ATGGATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATT 77986
|| ||||| ||| || |||| ||| || || | |||||||||| | | || |||
Sbjct 59743 ATCGATGGCAAGGTCGCCGAGAGACCGCAGCACATGATCATGCGTGTAGCAGTCGGAATT 59802
Query 77987 CATGGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTCCAATG-GTATGTT 78045
|| ||| | ||||| || | | || || || | | ||||| ||| ||| ||
Sbjct 59803 CACGGAGACGATATCGAGGCCGCCATCGAGACATACAACTACATGTCGAATAAGTAC-TT 59861
Query 78046 TATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCC--CGTCCACAGATGTCATCT 78103
| |||||| |||| || |||| | || ||||| || || ||| | || | |||
Sbjct 59862 CACACACGCATCACCAACACTGTTCAGCGCTGGTACGCCGAACGGCCA--GTTGGCTTCT 59919
Query 78104 TGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAG 78163
|| ||||| | | | || || ||| ||| | || || |||| || || | |
Sbjct 59920 TGCTTCCTCATCGACATGAAAGACGACAGCATTGAGGGAATTTACGATACACTGAAAATT 59979
Query 78164 TGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCA 78223
|| ||| ||| || ||| ||||||||||| ||||| | |||| | |||||||
Sbjct 59980 TGCGCTATGATCTCAAAGAATGCTGGTGGTATCGGTCTCAACTGTCACAAAATTCGTGCC 60039
Query 78224 AACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGG 78283
| | ||| ||| || || || || || | || | ||||| |||||| |
Sbjct 60040 ACCGGATCCTACATTGCTGGCACGAACGGCACATCCAACGGCCTGATTCCCATGCTTCGT 60099
Query 78284 GTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGGAAG------GGGTCA 78337
|| | ||| ||||| || |||||| | ||| ||| | | ||| || |
Sbjct 60100 GTCTACAACAACACAGCTCGTTATGTCGATCAA---GGTGGCAACAAGCGTCCTGGCGCT 60156
Query 78338 TTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTC 78397
|| || || || || || || |||||||||||||| || ||| |||| || ||
Sbjct 60157 TTTGCCATTTATCTCGAGCCATGGCACGCCGATGTCATTTCTTTCATGGATCTACGCAAG 60216
Query 78398 AACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGAT 78457
||||| || | || |||| ||| | || | ||| || ||||||| || |||
Sbjct 60217 AACCACGGAAAGGAAGAAGTTCGCGCTCGCGACCTGTTCTTCGCCCTGTGGATCCCCGAT 60276
Query 78458 CTTTTTATGAAGAGAGTTGA--GGAAGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGA 78515
|| || |||||| | || || ||| | | ||||| | || | || || | ||
Sbjct 60277 CTGTTCATGAAGCGTGTGGAACAGAACGCCG--AATGGACCCTGATGTGCCCCAACGAGT 60334
Query 78516 CTAAGGGTCTTTCAGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAG 78575
| |||||| | ||||| ||||| || |||||||| | | |||||| |||||
Sbjct 60335 GTCCCGGTCTTGCTGATGTGTACGGTGACGAATTCGAGGAGCTTTACACTCGCTACGAGA 60394
Query 78576 AGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAA-CTATGGAAAGCTATTATCAAA 78634
| ||||||| | |||| | ||| || ||| | ||| | || ||| | ||
Sbjct 60395 AAGAAGGTCGGGGACGCGAGACTGTGCGTGC-TCAGAAGATCTGGTATGCCATTCTGGAA 60453
Query 78635 AGTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTC 78693
|| || ||||| ||| || | || || ||||| || |||| ||| | |||
Sbjct 60454 GCCCAGACGGAGACTGGCGGACCTTTCATCCTCTACAAGGA-TGCTGCCAACCGCAAGAG 60512
Query 78694 TAACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATA 78753
||||| ||||| || || ||||| ||||| ||| | |||||||| || | || ||
Sbjct 60513 CAACCAGAAGAATCTCGGAACGATCAAGAGCTCCAACTTGTGCACAGAGATCATCGAGTA 60572
Query 78754 CACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGT 78813
||| | ||||| || ||||| ||||| | ||| | ||||| |||| | |||
Sbjct 60573 CACTGCACCTGATGAAGTCGCCGTATGCAATCTTGCATCTCTTGCTCTGCCAACCTATGT 60632
Query 78814 TGA--TCGAGAA 78823
|| |||||||
Sbjct 60633 CGACCTCGAGAA 60644
>seq537
Length=37262
Score = 100 bits (110), Expect = 4e-16
Identities = 272/406 (67%), Gaps = 23/406 (6%)
Strand=Plus/Plus
Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608
||||| ||||||||| | | | || | || || |||||||| || || || ||
Sbjct 22433 ATCCCTCGTGGTGCTATCTTGTCAGGACCTCCCGGAACTGGTAAGACGCTCCTCGCCAAG 22492
Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCC--GCGGCGAGTTTCATCG 198666
|||| || || || |||| || ||||||| | | | || || ||| | |
Sbjct 22493 GCTACAGCAGGCGAGAGTGGTGTGCC-TTTCTTCTCCGTTTCTGGCTCTGAATTTG-TGG 22550
Query 198667 AGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAA 198726
| ||||| |||||||||||| | | || || || || ||||||| | || || |||
Sbjct 22551 AAATGTTTGTTGGTGTTGGTCCAAGTCGTGTACGAGATCTCTTTGCCAATGCTCGCAAAA 22610
Query 198727 ATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGT-GGA 198785
| || |||||||||||||| ||||||||||| || |||| || |||| | ||
Sbjct 22611 ACACGCCTTGTATCATCTTCATCGATGAGATTGATGCCATTGGAAAAGCTCGTGCTAAGA 22670
Query 198786 ACTACTACACCTGGT------AATGATGAGCGTG--AGCAGACGATTAACCAGCTTCTCA 198837
||| || |||| ||||| ||||||| |||| || | |||||| | || |
Sbjct 22671 ACTCCT----TTGGTGGCGGCAATGACGAGCGTGAAAGCACAC--TCAACCAGATCCTGA 22724
Query 198838 CTGAGATGGATGGTTTTGACA-ATGAG-ACTGGTATCGTGGTGATTGCTGCTACAAATAG 198895
| || ||||| || || ||| | || || | |||||||| |||||| ||| || ||
Sbjct 22725 CAGAAATGGACGGATTCAACACGTCAGAACAAG--TCGTGGTGCTTGCTGGTACGAACAG 22782
Query 198896 GATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGAC 198941
||| |||| ||| | |||||| | || || || || || |||
Sbjct 22783 AGCAGATGTCCTTGATAAGGCACTGATGCGACCGGGACGTTTTGAC 22828
>seq465
Length=166670
Score = 96.9 bits (106), Expect = 5e-15
Identities = 175/254 (69%), Gaps = 8/254 (3%)
Strand=Plus/Plus
Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGT-ATGGCAAAATGATCGT-- 195358
|||||||||||| | ||||| || ||||| ||||| ||| | ||| || | | |
Sbjct 114354 ATTGGTATCGATCTCGGAACAACATACTCCTGTGTGGGTATCATG----AAGGGTGGAAA 114409
Query 195359 -GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417
|| || || | || |||||||| ||||| | ||| || |||| || || | |
Sbjct 114410 CGTCGAAATCCTGGTCAACGACCAAGGTAACCGAATAACACCTTCGTGGGTGGCTTGGAA 114469
Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477
||| |||| ||||| || |||||||||||||| || ||| || ||| || ||
Sbjct 114470 CGATGATGAGCGTCTTGTCGGAGATGCCGCAAAGAACCAGTTCGCGGCGAATCCACACAG 114529
Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537
||||||| ||| ||||| || ||||||||||||||| || || | || || |
Sbjct 114530 AACTGTCTACGACATCAAGCGCCTGATTGGTCGCAAGTTTGACGACAAAGACGTTCAGAA 114589
Query 195538 CGATATAAAGGACT 195551
||||| ||| |||
Sbjct 114590 GGATATGAAGCACT 114603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657845731411440
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