Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq590 143 2e-29
>seq590
Length=62005
Score = 143 bits (158), Expect = 2e-29
Identities = 214/304 (70%), Gaps = 0/304 (0%)
Strand=Plus/Plus
Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378
||||||||||||| | |||||| |||| || |||||| ||||||||| || ||
Sbjct 35459 CAGTCTCCGGGTTCTTGCATTCCTTGCACAGAACGAACTTGTTGATGAAACCGTCCAGAT 35518
Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||||| | ||| || ||||||| ||| |||| ||| | || |||| ||| ||
Sbjct 35519 AATCCTGCAGCTTGCTGGCCTCGTGGGCGCCATTGATGATCCAGCGATCGTCCTTGGGAT 35578
Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498
|||| | || || ||||| ||||| | |||||||| || | || | | ||||
Sbjct 35579 CGACATTGGTCTGGGCGCCGAGCTCAAAGCCGAAGTATTTGATGACATAGTTTGGTGGAC 35638
Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| | ||| | |||| || | || ||| |||||||| || |||||||||||||| |
Sbjct 35639 GAGCGAGCTGGTATGCGACTTGGCTCAAGTTCACGATGACGGTTTTGATGCCGTTGCCTT 35698
Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACAT 34618
| ||||| ||||||| ||| | ||| |||||||||||||| | ||| || ||||
Sbjct 35699 TGCCTTCCACCTTGGACTGGATTTTCTCCATCTTGTAGCGGTAGAAGGGGTCAGCGACAT 35758
Query 34619 TGCG 34622
|||
Sbjct 35759 CGCG 35762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412831401135311
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |