Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 149 1e-29
seq1704 141 1e-27
seq681 134 2e-25
seq721 109 9e-18
seq1459 87.8 3e-11
>seq1032
Length=45607
Score = 149 bits (164), Expect = 1e-29
Identities = 185/253 (73%), Gaps = 3/253 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAG---TTGGTCTTGCCCT 793947
|||| || ||||| || || || |||||| |||||| ||| |||||||||||
Sbjct 28492 TGACACCGGCCTTTTGGTAGTCTCCAACGCGCTTCTCGAAGAAGAAGTTGGTCTTGCCAC 28551
Query 793948 CGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACC 794007
| |||||||| |||||| | ||||||||||| | |||| ||||| | |
Sbjct 28552 CCAGCGAGATATTCTCCATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGGTTGC 28611
Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067
|||||| | ||||| |||||||| || ||||||||||||||||||||||| ||||
Sbjct 28612 CGAGCGCCAGGAGCAGACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGCGT 28671
Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127
||||||||| ||| || ||| || | || | | ||||| | ||||||| | ||||
Sbjct 28672 TCATGCCGAGGAGTGCGCAGGGGAGGGCGTCTGTCAGGAACTCCTGCTCGATCGCAACGG 28731
Query 794128 CCTCGATGATGAT 794140
|||||| ||||||
Sbjct 28732 CCTCGACGATGAT 28744
Score = 118 bits (130), Expect = 2e-20
Identities = 227/331 (69%), Gaps = 13/331 (4%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||||||||| ||| | |||||| || ||| || |||||||| || ||||||
Sbjct 28818 CCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGACCAGGCATGAGACCACGCTTC 28877
Query 794401 TTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457
|| ||||| ||||||| || || | | | ||||| ||||| || || || || ||
Sbjct 28878 TTCAGCCAGAAGATGGATGCAAAGGATCCG---GAGAAGAAGATACCTTCAACTGCAGCG 28934
Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517
||| | | || ||| ||| || || | || || | | ||||||| | |||
Sbjct 28935 AAGGCAATCAGTCGCATGGCGAAGGT---CGAGCTCTTGTCGCTGATCCATCGGAGTGCC 28991
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT--GGTCCT 794575
|| || |||||| | | | | || | ||||||||||| || |||| | || |
Sbjct 28992 CAGTCCGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGAACAGGTATGTTCGT 29051
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
| | || || | | ||| |||||||||||||| ||||| ||||| ||||||||||
Sbjct 29052 TGTTTG--GGCTCGCTAATGTATGTGTCGATGAGGAGGGAGTATGTCTCCGAGTGGATGT 29109
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || || ||||||||| ||||| |||||
Sbjct 29110 TCTCCATCATGATCTGGAATCCATAGAAGCA 29140
>seq1704
Length=66733
Score = 141 bits (156), Expect = 1e-27
Identities = 174/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| |||| || ||||| |||
Sbjct 56833 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGCTCGCCAGGCAG 56892
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| ||||| | || ||||| ||||| | |||||| |||||| || |
Sbjct 56893 GATCAGTCGCACAGATGTTTGGATTTCGCGCGATGAGATCGTAGACTTCTTGTT-GTATG 56951
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||| || ||| ||| |||| |||||||| || || ||||| |
Sbjct 56952 CAGCGAGCTTGGATGCCTCTGTTGCGACGCGCTCGAAGATGTCGTTCACGAAAGAGTTGA 57011
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||||||||| | ||||||||| || ||| ||||| ||||||||||| ||
Sbjct 57012 GGATCGACATGGCGCGGTTGGAGATACCAGTGTCTGGGTGGACCTGCTTGAGGAC 57066
>seq681
Length=141706
Score = 134 bits (148), Expect = 2e-25
Identities = 115/142 (81%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
||||||||||| | ||||| ||| | ||||| |||||||||||| | |||||||||
Sbjct 48979 AGGTCGACCAAGAGATGCTCTTCGAGATCATCCTTGCCGCCAACTACATGGACATCAAGG 48920
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
|||| || || |||| |||||||| || || ||| | ||||||||||||||||| || |
Sbjct 48919 CCCTTCTTGACGTGGGCTGCAAGACTGTTGCGAACATGATCAAGGGCAAGTCGCCGGAAG 48860
Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753
| ||||||||||| || |||||
Sbjct 48859 AGATCCGCAAGACATTCAACAT 48838
>seq721
Length=104476
Score = 109 bits (120), Expect = 9e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|| |||||||| || || |||| ||| |||| || |||||||| | |||||||||||
Sbjct 60131 TGATCGACATAACGAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGAT 60072
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
|||||| ||||| || | ||||| || | ||| || | ||||| | | |||
Sbjct 60071 GTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCG 60012
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || || || ||| ||||| | ||||| ||||||| || ||||| || |||||
Sbjct 60011 ATACCACCAGCATTCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCA 59952
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755
|| |||| | |||||||| | || ||||| ||
Sbjct 59951 ATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAGA 59917
>seq1459
Length=19671
Score = 87.8 bits (96), Expect = 3e-11
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 2411809 CGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCA 2411868
||| || |||| ||||| |||| ||| |||||||||| | |||| || || ||
Sbjct 13310 CGGAGCACGACAAGGTCGATGGGCGCTTTGAGATTGTCGAGGAAGCCGTGAACATCTGCC 13369
Query 2411869 AAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACA 2411928
|| || | | ||||| ||| || || || || ||||| | ||| | |||||||||
Sbjct 13370 AACAGCACCTTCACCTCACAGCCCGCAGCCAGGAACTCGGCAATTTTGAGCATGGGCACA 13429
Query 2411929 AAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGC 2411988
||||| || ||| ||||| || |||| || || ||||| || |||| ||| || |||
Sbjct 13430 AAGTATCCGCAATGAGGCTTTCCAGTCGTTGCAGTCCCCCAGTAGATGCTGAGTGGTCGC 13489
Query 2411989 T 2411989
|
Sbjct 13490 T 13490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916030778764853
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |