Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1917 93.3 3e-14 >seq1917 Length=9250 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||| || | ||| | || |||| ||| | |||||||||||||||||||| ||||| || Sbjct 8947 TCCACCACGCAAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGA 9006 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 | | || |||| |||| ||||| || ||||| ||||| || |||||||| | || Sbjct 9007 CAAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGG 9066 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | ||||||||||| | || || || || | |||| || || || || Sbjct 9067 GATTCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCAC 9126 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAA 34968 || | || || |||||||| ||||| ||||| || || Sbjct 9127 TTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325684754064713